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CAZyme Information: MGYG000002470_02100

You are here: Home > Sequence: MGYG000002470_02100

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides intestinalis
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides intestinalis
CAZyme ID MGYG000002470_02100
CAZy Family GH10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
735 MGYG000002470_3|CGC13 81560.4 4.3579
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002470 5774847 Isolate Ireland Europe
Gene Location Start: 513663;  End: 515870  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 469 730 7.1e-46 0.6831683168316832

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00633 Glyco_10 4.50e-29 470 728 54 263
Glycosyl hydrolase family 10.
pfam00331 Glyco_hydro_10 1.57e-27 474 730 100 310
Glycosyl hydrolase family 10.
COG3693 XynA 1.06e-17 468 735 117 344
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
pfam00331 Glyco_hydro_10 3.80e-11 51 134 1 85
Glycosyl hydrolase family 10.
pfam02018 CBM_4_9 1.98e-05 126 249 12 128
Carbohydrate binding domain. This family includes diverse carbohydrate binding domains.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QDO69412.1 0.0 1 735 8 742
QUT92912.1 6.86e-316 1 735 1 730
QUT32420.1 4.87e-258 16 735 11 746
QRN02128.1 4.87e-258 16 735 11 746
CBK67953.1 6.42e-258 16 735 19 754

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1W32_A 4.95e-13 490 735 117 348
The3-dimensional structure of a thermostable mutant of a xylanase (Xyn10A) from Cellvibrio japonicus [Cellvibrio japonicus],1W32_B The 3-dimensional structure of a thermostable mutant of a xylanase (Xyn10A) from Cellvibrio japonicus [Cellvibrio japonicus]
1W3H_A 5.41e-13 490 735 128 359
The3-dimensional structure of a thermostable mutant of a xylanase (Xyn10A) from Cellvibrio japonicus [Cellvibrio japonicus],1W3H_B The 3-dimensional structure of a thermostable mutant of a xylanase (Xyn10A) from Cellvibrio japonicus [Cellvibrio japonicus]
1CLX_A 6.56e-13 490 735 116 347
CatalyticCore Of Xylanase A [Cellvibrio japonicus],1CLX_B Catalytic Core Of Xylanase A [Cellvibrio japonicus],1CLX_C Catalytic Core Of Xylanase A [Cellvibrio japonicus],1CLX_D Catalytic Core Of Xylanase A [Cellvibrio japonicus]
1W2P_A 6.61e-13 490 735 117 348
The3-dimensional structure of a xylanase (Xyn10A) from Cellvibrio japonicus [Cellvibrio japonicus],1W2P_B The 3-dimensional structure of a xylanase (Xyn10A) from Cellvibrio japonicus [Cellvibrio japonicus]
1W2V_A 8.84e-13 490 735 117 348
The3-dimensional structure of a thermostable mutant of a xylanase (Xyn10A) from Cellvibrio japonicus [Cellvibrio japonicus],1W2V_B The 3-dimensional structure of a thermostable mutant of a xylanase (Xyn10A) from Cellvibrio japonicus [Cellvibrio japonicus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
W0HFK8 1.68e-13 471 732 131 331
Endo-1,4-beta-xylanase 1 OS=Rhizopus oryzae OX=64495 GN=xyn1 PE=1 SV=1
Q6PRW6 1.18e-12 471 725 131 324
Endo-1,4-beta-xylanase OS=Penicillium chrysogenum OX=5076 GN=Xyn PE=1 SV=1
P29417 2.82e-12 471 725 131 324
Endo-1,4-beta-xylanase OS=Penicillium chrysogenum OX=5076 GN=XYLP PE=1 SV=2
Q4P902 6.25e-12 474 725 139 332
Endo-1,4-beta-xylanase UM03411 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=UMAG_03411 PE=1 SV=1
P14768 9.65e-12 490 735 380 611
Endo-1,4-beta-xylanase A OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=xynA PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000044 0.018461 0.981513 0.000008 0.000013 0.000011

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002470_02100.