CAZyme Information: MGYG000002468_02575

Basic Information

• Species: Enterococcus caccae
• Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus; Enterococcus caccae
• CAZyme ID: MGYG000002468_02575
• CAZy Family: GH23
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
190	MGYG000002468_15|CGC1	20414.45	4.2341

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002468	3531321	Isolate	United States	North America

• Gene Location: Start: 25670; End: 26242 Strand: +

Full Sequence      

MKSLKTILLATTLTAGFGIFMGTTDAHADSLYTVKSGDTLSTISHQFSGDNSMIDLIAKD
NNISNINMIFEGEQLTIRTADEVAQAPVQQESAQQATQAAVQETPVAAAPVAQEAAPTTS
SAKEWIAQKESSGSYGATNGKYIGRYQLDASYLNGDYSEANQERVADSYVAGRYGSWEAA
QAFWMANGWY

Enzyme Prediction     

No EC number prediction in MGYG000002468_02575.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd00118	LysM	2.70e-08	32	77	3	45	Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
smart00257	LysM	1.41e-07	32	77	2	44	Lysin motif.
pfam01476	LysM	2.16e-06	32	77	1	42	LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known.
PRK11198	PRK11198	2.50e-04	23	77	89	145	LysM domain/BON superfamily protein; Provisional
COG1652	XkdP	0.004	23	77	204	261	Nucleoid-associated protein YgaU, contains BON and LysM domains [Function unknown].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ALS36128.1	4.24e-114	1	190	1	194
ALS01909.1	7.71e-94	1	190	1	194
BBC60488.1	1.92e-78	1	190	1	196
AIM25355.1	1.92e-78	1	190	1	196
BAL61624.1	1.92e-78	1	190	1	196

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000478	0.998652	0.000205	0.000237	0.000207	0.000185

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002468_02575.