logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002455_01729

You are here: Home > Sequence: MGYG000002455_01729

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides cellulosilyticus
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides cellulosilyticus
CAZyme ID MGYG000002455_01729
CAZy Family PL13
CAZyme Description Heparin lyase I
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
389 MGYG000002455_6|CGC5 44401.71 9.1405
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002455 6974062 Isolate United States North America
Gene Location Start: 268613;  End: 269782  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002455_01729.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL13 23 382 4.4e-203 0.9889807162534435

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14099 Polysacc_lyase 1.37e-15 51 375 9 208
Polysaccharide lyase. This family includes heparin lyase I, EC:4.2.2.7. Heparin lyase I depolymerizes heparin by cleaving the glycosidic linkage next to an iduronic acid moiety. The structure of heparin lyase I consists of a beta-jelly roll domain with a long, deep substrate-binding groove and an unusual thumb domain containing many basic residues extending from the main body of the enzyme. This family also includes glucuronan lyase, EC:4.2.2.14. The structure glucuronan lyase is a beta-jelly roll.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT89934.1 2.66e-293 1 389 1 389
ALJ58949.1 1.26e-291 1 389 1 389
QDO67520.1 2.72e-264 1 386 1 386
AVM56394.1 1.01e-245 11 387 10 386
ADV43611.1 8.55e-239 1 389 1 386

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3ILR_A 1.16e-201 24 382 3 369
Structureof Heparinase I from Bacteroides thetaiotaomicron in complex with tetrasaccharide product [Bacteroides thetaiotaomicron]
3IKW_A 1.34e-201 22 382 2 373
Structureof Heparinase I from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron]
3IMN_A 1.04e-199 22 382 4 375
Crystalstructure of heparin lyase I from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron],3IN9_A Crystal structure of heparin lyase I complexed with disaccharide heparin [Bacteroides thetaiotaomicron]
3INA_A 3.44e-198 22 382 4 375
Crystalstructure of heparin lyase I H151A mutant complexed with a dodecasaccharide heparin [Bacteroides thetaiotaomicron]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q05819 1.40e-184 22 382 21 381
Heparin lyase I OS=Pedobacter heparinus OX=984 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000263 0.999021 0.000208 0.000178 0.000164 0.000154

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002455_01729.