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CAZyme Information: MGYG000002424_02273

You are here: Home > Sequence: MGYG000002424_02273

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Monoglobus pectinilyticus
Lineage Bacteria; Firmicutes_A; Clostridia; Monoglobales; Monoglobaceae; Monoglobus; Monoglobus pectinilyticus
CAZyme ID MGYG000002424_02273
CAZy Family CE12
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2130 MGYG000002424_1|CGC32 231296.07 4.4601
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002424 2757122 Isolate New Zealand Oceania
Gene Location Start: 2707308;  End: 2713700  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002424_02273.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE12 234 461 4.6e-42 0.9952380952380953
CE8 1503 1680 4.1e-39 0.5659722222222222

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd01821 Rhamnogalacturan_acetylesterase_like 8.51e-33 233 461 1 198
Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
pfam01095 Pectinesterase 7.97e-22 1487 1700 81 294
Pectinesterase.
COG4677 PemB 1.24e-20 1508 1653 215 373
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
PLN02773 PLN02773 2.28e-17 1506 1677 120 276
pectinesterase
PLN02217 PLN02217 4.15e-16 1435 1713 263 551
probable pectinesterase/pectinesterase inhibitor

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AUO20403.1 0.0 1 2130 1 2130
AUO19966.1 9.71e-270 1115 2130 80 1152
AUO19837.1 2.46e-204 1119 2130 1066 1999
QYR20260.1 7.73e-154 26 711 24 696
AWV32802.1 7.43e-153 1 711 1 697

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5C1C_A 1.75e-14 1500 1690 110 294
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
5C1E_A 1.75e-14 1500 1690 110 294
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
2NSP_A 2.99e-14 1509 1690 135 337
ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]
3UW0_A 6.72e-13 1512 1676 164 342
Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]
1QJV_A 7.40e-10 1509 1676 135 318
ChainA, PECTIN METHYLESTERASE [Dickeya chrysanthemi],1QJV_B Chain B, PECTIN METHYLESTERASE [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O31523 3.29e-16 235 461 8 212
Rhamnogalacturonan acetylesterase RhgT OS=Bacillus subtilis (strain 168) OX=224308 GN=rhgT PE=1 SV=1
Q3E989 1.01e-14 1344 1703 136 489
Probable pectinesterase/pectinesterase inhibitor 54 OS=Arabidopsis thaliana OX=3702 GN=PME54 PE=2 SV=1
Q9LVQ0 3.75e-14 1458 1677 60 282
Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1
A2QK82 4.27e-14 1454 1690 97 322
Probable pectinesterase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pmeA PE=3 SV=1
Q9LUL8 4.69e-14 1487 1713 740 959
Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana OX=3702 GN=PME26 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000284 0.998980 0.000241 0.000178 0.000162 0.000150

TMHMM  Annotations      download full data without filtering help

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