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CAZyme Information: MGYG000002423_00306

You are here: Home > Sequence: MGYG000002423_00306

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pantoea septica
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Pantoea; Pantoea septica
CAZyme ID MGYG000002423_00306
CAZy Family GT5
CAZyme Description Glycogen synthase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
477 MGYG000002423_2|CGC1 52749.21 5.8432
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002423 4877109 Isolate United States North America
Gene Location Start: 264210;  End: 265643  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 2.4.1.21

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT5 2 474 2.8e-158 0.9957627118644068

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK00654 glgA 0.0 1 477 1 464
glycogen synthase GlgA.
cd03791 GT5_Glycogen_synthase_DULL1-like 0.0 2 475 1 474
Glycogen synthase GlgA and similar proteins. This family is most closely related to the GT5 family of glycosyltransferases. Glycogen synthase (EC:2.4.1.21) catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
TIGR02095 glgA 0.0 1 476 1 473
glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. [Energy metabolism, Biosynthesis and degradation of polysaccharides]
PRK14099 PRK14099 0.0 1 477 4 480
glycogen synthase GlgA.
COG0297 GlgA 0.0 1 477 1 479
Glycogen synthase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGR05111.1 0.0 1 477 1 477
ADU67572.1 0.0 1 477 1 477
QGY27608.1 0.0 1 477 1 477
QDY40602.1 0.0 1 477 1 477
AIR84106.1 0.0 1 477 1 477

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2QZS_A 1.29e-293 1 476 1 476
CrystalStructure of Wild-type E.coli GS in complex with ADP and Glucose(wtGSb) [Escherichia coli],2R4T_A Crystal Structure of Wild-type E.coli GS in Complex with ADP and Glucose(wtGSc) [Escherichia coli],2R4U_A Crystal Structure of Wild-type E.coli GS in complex with ADP and Glucose(wtGSd) [Escherichia coli],3GUH_A Crystal Structure of Wild-type E.coli GS in complex with ADP and DGM [Escherichia coli K-12]
3D1J_A 5.52e-293 1 476 1 476
ChainA, Glycogen synthase [Escherichia coli]
3COP_A 1.06e-292 1 476 1 476
ChainA, Glycogen synthase [Escherichia coli],3CX4_A Chain A, Glycogen synthase [Escherichia coli]
1RZU_A 8.02e-132 1 477 1 476
ChainA, Glycogen synthase 1 [Agrobacterium tumefaciens],1RZU_B Chain B, Glycogen synthase 1 [Agrobacterium tumefaciens]
1RZV_A 3.76e-127 2 477 2 476
ChainA, Glycogen synthase 1 [Agrobacterium tumefaciens],1RZV_B Chain B, Glycogen synthase 1 [Agrobacterium tumefaciens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B2VJU7 1.43e-313 1 477 1 477
Glycogen synthase OS=Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99) OX=465817 GN=glgA PE=3 SV=1
A8AQY0 1.35e-295 1 476 1 476
Glycogen synthase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) OX=290338 GN=glgA PE=3 SV=1
A7MGE0 3.17e-294 1 477 1 477
Glycogen synthase OS=Cronobacter sakazakii (strain ATCC BAA-894) OX=290339 GN=glgA PE=3 SV=1
C0Q0K9 4.50e-294 1 476 1 476
Glycogen synthase OS=Salmonella paratyphi C (strain RKS4594) OX=476213 GN=glgA PE=3 SV=1
B5FKF4 4.50e-294 1 476 1 476
Glycogen synthase OS=Salmonella dublin (strain CT_02021853) OX=439851 GN=glgA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000053 0.000002 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002423_00306.