dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000002418_01464

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Basic Information help

Species

Parabacteroides chinchillae

Lineage

Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides chinchillae

CAZyme ID

MGYG000002418_01464

CAZy Family

GH109

CAZyme Description

Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
460	MGYG000002418_2\|CGC2	50681.57	7.4336

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002418	3822361	Isolate	not provided	not provided

Gene Location

Start: 81815; End: 83197 Strand: +

Full Sequence Download help

Enzyme Prediction help

EC	3.2.1.18

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH109	68	241	9.3e-18	0.42105263157894735

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG0673	MviM	2.11e-34	67	421	1	338	Predicted dehydrogenase [General function prediction only].
TIGR04380	myo_inos_iolG	1.88e-13	69	317	1	222	inositol 2-dehydrogenase. All members of the seed alignment for this model are known or predicted inositol 2-dehydrogenase sequences co-clustered with other enzymes for catabolism of myo-inositol or closely related compounds. Inositol 2-dehydrogenase catalyzes the first step in inositol catabolism. Members of this family may vary somewhat in their ranges of acceptable substrates and some may act on analogs to myo-inositol rather than myo-inositol per se. [Energy metabolism, Sugars]
pfam01408	GFO_IDH_MocA	1.81e-10	70	192	1	112	Oxidoreductase family, NAD-binding Rossmann fold. This family of enzymes utilize NADP or NAD. This family is called the GFO/IDH/MOCA family in swiss-prot.
pfam03435	Sacchrp_dh_NADP	4.19e-05	74	196	3	115	Saccharopine dehydrogenase NADP binding domain. This family contains the NADP binding domain of saccharopine dehydrogenase. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase. The saccharopine dehydrogenase can also function as a saccharopine reductase.
PRK10206	PRK10206	1.65e-04	140	226	62	145	putative oxidoreductase; Provisional

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BBK93797.1	3.41e-316	1	460	1	460
QIX65768.1	3.41e-316	1	460	1	460
QUT96603.1	3.41e-316	1	460	1	460
AST52349.1	3.41e-316	1	460	1	460
QUT20197.1	3.41e-316	1	460	1	460

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3CEA_A	1.77e-09	68	295	7	210	ChainA, Myo-inositol 2-dehydrogenase [Lactiplantibacillus plantarum WCFS1],3CEA_B Chain B, Myo-inositol 2-dehydrogenase [Lactiplantibacillus plantarum WCFS1],3CEA_C Chain C, Myo-inositol 2-dehydrogenase [Lactiplantibacillus plantarum WCFS1],3CEA_D Chain D, Myo-inositol 2-dehydrogenase [Lactiplantibacillus plantarum WCFS1]
3E18_A	1.40e-08	68	356	4	264	CRYSTALSTRUCTURE OF NAD-BINDING PROTEIN FROM Listeria innocua [Listeria innocua],3E18_B CRYSTAL STRUCTURE OF NAD-BINDING PROTEIN FROM Listeria innocua [Listeria innocua]
4N54_A	1.30e-06	68	294	13	215	ChainA, Inositol dehydrogenase [Lacticaseibacillus casei BL23],4N54_B Chain B, Inositol dehydrogenase [Lacticaseibacillus casei BL23],4N54_C Chain C, Inositol dehydrogenase [Lacticaseibacillus casei BL23],4N54_D Chain D, Inositol dehydrogenase [Lacticaseibacillus casei BL23]
4MKX_A	1.31e-06	68	294	16	218	ChainA, Inositol dehydrogenase [Lacticaseibacillus casei BL23],4MKZ_A Chain A, Inositol dehydrogenase [Lacticaseibacillus casei BL23]
3EC7_A	9.61e-06	67	225	21	168	CrystalStructure of Putative Dehydrogenase from Salmonella typhimurium LT2 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],3EC7_B Crystal Structure of Putative Dehydrogenase from Salmonella typhimurium LT2 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],3EC7_C Crystal Structure of Putative Dehydrogenase from Salmonella typhimurium LT2 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],3EC7_D Crystal Structure of Putative Dehydrogenase from Salmonella typhimurium LT2 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],3EC7_E Crystal Structure of Putative Dehydrogenase from Salmonella typhimurium LT2 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],3EC7_F Crystal Structure of Putative Dehydrogenase from Salmonella typhimurium LT2 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],3EC7_G Crystal Structure of Putative Dehydrogenase from Salmonella typhimurium LT2 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],3EC7_H Crystal Structure of Putative Dehydrogenase from Salmonella typhimurium LT2 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
A1S4U5	1.05e-08	7	246	4	227	Glycosyl hydrolase family 109 protein OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) OX=326297 GN=Sama_1194 PE=3 SV=1
A8H2K3	4.30e-08	7	239	3	217	Glycosyl hydrolase family 109 protein OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) OX=398579 GN=Spea_1465 PE=3 SV=1
A0KYQ9	7.55e-08	9	246	6	228	Glycosyl hydrolase family 109 protein 2 OS=Shewanella sp. (strain ANA-3) OX=94122 GN=Shewana3_2701 PE=3 SV=1
Q0HH61	7.55e-08	9	246	6	228	Glycosyl hydrolase family 109 protein 2 OS=Shewanella sp. (strain MR-4) OX=60480 GN=Shewmr4_2535 PE=3 SV=1
Q0HTG8	7.55e-08	9	246	6	228	Glycosyl hydrolase family 109 protein 2 OS=Shewanella sp. (strain MR-7) OX=60481 GN=Shewmr7_2602 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as TAT

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000002	0.000000	0.000002	0.972323	0.027667	0.000000

TMHMM Annotations help

There is no transmembrane helices in MGYG000002418_01464.