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CAZyme Information: MGYG000002417_00591
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Lachnoclostridium_A edouardi | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnoclostridium_A; Lachnoclostridium_A edouardi | |||||||||||
| CAZyme ID | MGYG000002417_00591 | |||||||||||
| CAZy Family | GH73 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 641556; End: 643667 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4193 | LytD | 1.95e-20 | 380 | 535 | 100 | 245 | Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism]. |
| pfam08239 | SH3_3 | 3.58e-11 | 46 | 106 | 1 | 53 | Bacterial SH3 domain. |
| COG3103 | YgiM | 7.19e-09 | 13 | 88 | 4 | 71 | Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only]. |
| smart00287 | SH3b | 7.21e-09 | 41 | 103 | 4 | 58 | Bacterial SH3 domain homologues. |
| pfam12733 | Cadherin-like | 1.53e-08 | 564 | 635 | 5 | 88 | Cadherin-like beta sandwich domain. This domain is found in several bacterial, metazoan and chlorophyte algal proteins. A profile-profile comparison recovered the cadherin domain and a comparison of the predicted structure of this domain with the crystal structure of the cadherin showed a congruent seven stranded secondary structure. The domain is widespread in bacteria and seen in the firmicutes, actinobacteria, certain proteobacteria, bacteroides and chlamydiae with an expansion in Clostridium. In contrast, it is limited in its distribution in eukaryotes suggesting that it was derived through lateral transfer from bacteria. In prokaryotes, this domain is widely fused to other domains such as FNIII (Fibronectin Type III), TIG, SLH (S-layer homology), discoidin, cell-wall-binding repeat domain and alpha-amylase-like glycohydrolases. These associations are suggestive of a carbohydrate-binding function for this cadherin-like domain. In animal proteins it is associated with an ATP-grasp domain. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QRV21758.1 | 2.31e-243 | 1 | 647 | 1 | 619 |
| ADL03932.1 | 2.31e-243 | 1 | 647 | 1 | 619 |
| CBK77705.1 | 8.33e-227 | 1 | 643 | 1 | 637 |
| SET60659.1 | 1.15e-225 | 1 | 647 | 1 | 620 |
| ASN95383.1 | 1.36e-217 | 7 | 648 | 7 | 694 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4PI7_A | 7.69e-11 | 381 | 525 | 85 | 225 | ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50] |
| 4PI8_A | 4.65e-10 | 381 | 525 | 85 | 225 | ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50] |
| 6FXO_A | 1.05e-09 | 386 | 534 | 98 | 243 | ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50] |
| 2KRS_A | 3.63e-07 | 40 | 106 | 2 | 59 | SolutionNMR structure of SH3 domain from CPF_0587 (fragment 415-479) from Clostridium perfringens. Northeast Structural Genomics Consortium (NESG) Target CpR74A. [Clostridium perfringens] |
| 2KT8_A | 6.42e-06 | 45 | 107 | 10 | 62 | SolutionNMR structure of the CPE1231(468-535) protein from Clostridium perfringens, Northeast Structural Genomics Consortium Target CpR82B [Clostridium perfringens] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q8CPQ1 | 1.82e-09 | 386 | 534 | 1189 | 1334 | Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=atl PE=3 SV=1 |
| O33635 | 4.13e-09 | 386 | 534 | 1189 | 1334 | Bifunctional autolysin OS=Staphylococcus epidermidis OX=1282 GN=atl PE=1 SV=1 |
| Q5HQB9 | 4.13e-09 | 386 | 534 | 1189 | 1334 | Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=atl PE=3 SV=1 |
| P39848 | 1.88e-08 | 380 | 534 | 735 | 879 | Beta-N-acetylglucosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=lytD PE=1 SV=1 |
| Q8NX96 | 2.75e-08 | 386 | 534 | 1110 | 1255 | Bifunctional autolysin OS=Staphylococcus aureus (strain MW2) OX=196620 GN=atl PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.003228 | 0.995519 | 0.000482 | 0.000331 | 0.000220 | 0.000205 |
