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CAZyme Information: MGYG000002416_02255
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Hydrogeniiclostridium mannosilyticum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; Hydrogeniiclostridium; Hydrogeniiclostridium mannosilyticum | |||||||||||
| CAZyme ID | MGYG000002416_02255 | |||||||||||
| CAZy Family | GH24 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 52174; End: 55293 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH24 | 780 | 886 | 5.1e-17 | 0.7299270072992701 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd00737 | lyz_endolysin_autolysin | 9.15e-16 | 784 | 894 | 2 | 100 | endolysin and autolysin. The dsDNA phages of eubacteria use endolysins or muralytic enzymes in conjunction with hollin, a small membrane protein, to degrade the peptidoglycan found in bacterial cell walls. Similarly, bacteria produce autolysins to facilitate the biosynthesis of its cell wall heteropolymer peptidoglycan and cell division. Endolysins and autolysins are found in viruses and bacteria, respectively. Both endolysin and autolysin enzymes cleave the glycosidic beta 1,4-bonds between the N-acetylmuramic acid and the N-acetylglucosamine of the peptidoglycan. |
| pfam08239 | SH3_3 | 1.63e-13 | 272 | 325 | 1 | 54 | Bacterial SH3 domain. |
| pfam08239 | SH3_3 | 9.38e-13 | 515 | 568 | 1 | 54 | Bacterial SH3 domain. |
| COG3103 | YgiM | 1.67e-12 | 4 | 165 | 2 | 149 | Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only]. |
| pfam08239 | SH3_3 | 1.72e-12 | 438 | 491 | 1 | 54 | Bacterial SH3 domain. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ALA54025.1 | 1.06e-65 | 37 | 568 | 508 | 991 |
| BAD65631.1 | 4.48e-65 | 37 | 568 | 508 | 991 |
| QNM43054.1 | 1.04e-64 | 37 | 568 | 508 | 991 |
| AST96696.1 | 1.04e-64 | 37 | 568 | 508 | 991 |
| BBO00108.1 | 2.40e-63 | 38 | 568 | 199 | 697 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2KQ8_A | 1.25e-06 | 116 | 166 | 12 | 61 | ChainA, Cell wall hydrolase [[Bacillus thuringiensis] serovar konkukian] |
| 2KRS_A | 3.56e-06 | 433 | 497 | 4 | 66 | SolutionNMR structure of SH3 domain from CPF_0587 (fragment 415-479) from Clostridium perfringens. Northeast Structural Genomics Consortium (NESG) Target CpR74A. [Clostridium perfringens] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| O32041 | 4.17e-26 | 32 | 318 | 28 | 311 | Putative N-acetylmuramoyl-L-alanine amidase YrvJ OS=Bacillus subtilis (strain 168) OX=224308 GN=yrvJ PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000266 | 0.999028 | 0.000179 | 0.000197 | 0.000163 | 0.000139 |
