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CAZyme Information: MGYG000002414_00581
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Paenibacillus odorifer | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus; Paenibacillus odorifer | |||||||||||
| CAZyme ID | MGYG000002414_00581 | |||||||||||
| CAZy Family | GH121 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 642229; End: 648603 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH121 | 5 | 1151 | 2.2e-262 | 0.7765804597701149 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00395 | SLH | 8.28e-09 | 2003 | 2044 | 1 | 42 | S-layer homology domain. |
| NF033190 | inl_like_NEAT_1 | 1.35e-08 | 1941 | 2117 | 580 | 749 | NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading. |
| pfam00395 | SLH | 2.63e-08 | 1943 | 1984 | 1 | 42 | S-layer homology domain. |
| NF033190 | inl_like_NEAT_1 | 4.15e-07 | 1996 | 2121 | 575 | 692 | NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading. |
| pfam07532 | Big_4 | 9.07e-07 | 1389 | 1447 | 1 | 59 | Bacterial Ig-like domain (group 4). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in a variety of bacterial surface proteins. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AWV31661.1 | 0.0 | 1 | 2124 | 1 | 2124 |
| AIQ72297.1 | 0.0 | 1 | 2124 | 1 | 2125 |
| AIQ16841.1 | 0.0 | 1 | 2124 | 1 | 2137 |
| ASA23852.1 | 0.0 | 1 | 2124 | 1 | 2129 |
| AIQ52843.1 | 0.0 | 1 | 2119 | 1 | 2113 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6M5A_A | 1.03e-125 | 91 | 879 | 61 | 845 | Crystalstructure of GH121 beta-L-arabinobiosidase HypBA2 from Bifidobacterium longum [Bifidobacterium longum] |
| 5MQS_A | 4.68e-20 | 323 | 839 | 651 | 1106 | SialidaseBT_1020 [Bacteroides thetaiotaomicron] |
| 5MQR_A | 7.02e-19 | 323 | 839 | 651 | 1106 | SialidaseBT_1020 [Bacteroides thetaiotaomicron] |
| 4AQ1_A | 1.24e-07 | 1942 | 2118 | 3 | 166 | Structureof the SbsB S-layer protein of Geobacillus stearothermophilus PV72p2 in complex with nanobody KB6 [Geobacillus stearothermophilus] |
| 4AQ1_C | 1.24e-07 | 1942 | 2118 | 3 | 166 | Structureof the SbsB S-layer protein of Geobacillus stearothermophilus PV72p2 in complex with nanobody KB6 [Geobacillus stearothermophilus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| E8MGH9 | 4.28e-168 | 91 | 1460 | 92 | 1381 | Beta-L-arabinobiosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA2 PE=1 SV=1 |
| C6CRV0 | 6.27e-32 | 1752 | 2121 | 1088 | 1460 | Endo-1,4-beta-xylanase A OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=xynA1 PE=1 SV=1 |
| P38536 | 9.57e-32 | 1770 | 2122 | 1520 | 1857 | Amylopullulanase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=amyB PE=3 SV=2 |
| P38535 | 9.66e-25 | 1936 | 2122 | 901 | 1083 | Exoglucanase XynX OS=Acetivibrio thermocellus OX=1515 GN=xynX PE=3 SV=1 |
| P19424 | 9.02e-15 | 1943 | 2119 | 41 | 213 | Endoglucanase OS=Bacillus sp. (strain KSM-635) OX=1415 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000418 | 0.998646 | 0.000242 | 0.000264 | 0.000225 | 0.000183 |
