CAZyme Information: MGYG000002407_00740

Basic Information

• Species: Cohnella sp900169535
• Lineage: Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Cohnella; Cohnella sp900169535
• CAZyme ID: MGYG000002407_00740
• CAZy Family: GH36
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
905	MGYG000002407_15|CGC2	97973.13	5.8846

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002407	6325359	Isolate	not provided	not provided

• Gene Location: Start: 87491; End: 90208 Strand: -

Full Sequence      

MSASSKPKVRTGWLAAVAACVLLAAMPIGSGKANAAASGDAYVNYDSATRTWTMGTGKVE
KAVRFGEGTYTMTRLVNKATGRNYVQGASPNSDEFNVKIGTASYNGSGGGWIYDSYRTQT
LAQGELQLSVVIHNSVVEVTRHYVAYPSTGVIEEWSEFRNISGSSQSFADISAFRQRVMQ
NDAGQVDLYVMSGDKADTPVWNKLLDPRPATSNTTFAGNGSNKYHPFLALYNRTLSEGIF
VTWDYTGNWLAEVGDFSGRTFAQMKTSSGPVTIANNATLKGPLSRTGVFSGDLDDMGNTI
LDFTYRYKWDYTREEYFPLVRFGGYGSDPAHILNKIHSTRYIGGDLIWIDAGWQDYLGDW
NNKPGESNAAYNAYAVKNGQKLGLWLVPWGAEANSQIAAAHPEWMANPSWYKAGLKTERQ
DVVAHIVAMLNQKQTEFGSFMLKTDYGADSGTILKANNILYILEQFKKQNPGAALLLCSD
GAGLLSIETARFSDVVQLRDGAAGSEDGYYTSLLFPSEKLQVSYGRGDIGNYSKSNRYLL
SYHLTIAGKVDGTPSEMEPLRRDVDLYRYLKTQGVMGRWVKVYRPAVSAGDKEGILQKMS
GDGSKGYITFAKKDAMVGTNVTVFPKGLNASASYTVATLEGGKTTETRSGSYWMTNGIPL
TPFKQGEVIFFNLENRPMSGSDTTAPSAPGNVSQAEASNLGYNGIEVTWTEGADDNWISY
YEIFKNGAAYDKVSKGTYYFDKEGVSGDEYQVRTVDGDGNVSALAPTAVGPANVAAGKPA
TADSVYDVFAAEKAVDGVVSDESRWVSANTNGPHWLEVDLGQSYAIGSAEVHTGHSDGNA
VSNFKLQAWNGSGWTDIPGASASGNPKTSTVVSLAFADPVATSKVRFVSTDNGYVRVKEL
KLFAL

Enzyme Prediction     

No EC number prediction in MGYG000002407_00740.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH36	134	520	9.7e-21	0.622093023255814

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam00754	F5_F8_type_C	1.45e-13	779	891	1	114	F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
cd00057	FA58C	4.03e-08	767	892	1	131	Substituted updates: Jan 31, 2002
cd14791	GH36	5.41e-08	342	483	31	202	glycosyl hydrolase family 36 (GH36). GH36 enzymes occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-galactosidase, alpha-N-acetylgalactosaminidase, stachyose synthase, and raffinose synthase. All GH36 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH36 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively.
pfam02065	Melibiase	0.003	342	446	70	191	Melibiase. Glycoside hydrolase families GH27, GH31 and GH36 form the glycoside hydrolase clan GH-D. Glycoside hydrolase family 36 can be split into 11 families, GH36A to GH36K. This family includes enzymes from GH36A-B and GH36D-K and from GH27.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QGU28165.1	6.90e-254	14	820	14	799
QNK59398.1	1.05e-177	33	769	34	789
QTH40290.1	4.64e-172	4	781	3	803
QNA93536.1	1.72e-122	35	758	45	787
QYM63786.1	4.29e-121	43	758	3	737

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000309	0.999011	0.000189	0.000182	0.000154	0.000138

TMHMM  Annotations     

start	end
12	29