CAZyme Information: MGYG000002403_04994

Basic Information

• Species: Robinsoniella peoriensis
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella peoriensis
• CAZyme ID: MGYG000002403_04994
• CAZy Family: GH127
• CAZyme Description: Non-reducing end beta-L-arabinofuranosidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
658	MGYG000002403_132|CGC5	74801.17	4.6356

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002403	7202103	Isolate	not provided	not provided

• Gene Location: Start: 166623; End: 168599 Strand: +

Full Sequence      

MLTNTTKSPFSKVSPLPWNAVNWTRGFWADAFTACAGDTVPHLQSMFEAKDISHVVENFR
ICAGEAEGTFDGTNFGDGDFYKWMESAMYSAAKNGNQELLDQLDDYIDLIGRAQLEDGYI
STKQILGERQNNGIARLGDINDFEVYNFGHLFTAACLYKRITGKENFLEIAKKAAVYLDQ
MYQDNAKNGEVQTAVCPSHYMGLIEMYRTTGDKKYLELAKLAIELRDSVKDGTDDNQDRI
PLKQHDKILGHAVRSNYLYAGVADLYAETGESEYKEMLDKVWRNLVDKKIYITGGCGALY
NGTSPYGNFFIDQKIHQAYGYEYQLPNITAYNETCASIGSVFWAYRMFQADPKAEYFDII
ERTMLNVNLAAVSMDGKKYFYENMLRRAKKLDYELIWPLERSEYILSYCCPPNLARTIAQ
SSEYAYTVSDDTLWMGMYGASRSQIELPCGASFTLIQDTNYPYDGNISFHIEDLKYASPD
HKTPIYLNVRIPGWVENGTITIGGETNICLTQNDSQTYKKICINPDTVSDVTVSFDMPAR
LSTAHALVEETNNQAALERGPLVYCIESPDADVETLDDLLWKLDAEFTPVAYTIGGRDLA
ALEGDVYRINREEYNRDSLYQTLRYHGMSTTHIRLIPYFAWDNRGFGEMKIWMPVAYK

Enzyme Prediction     

EC	3.2.1.-

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH127	21	565	1.6e-159	0.9980916030534351

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam07944	Glyco_hydro_127	4.63e-137	20	565	1	503	Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.
COG3533	COG3533	1.69e-116	26	653	21	585	Uncharacterized conserved protein, DUF1680 family [Function unknown].
cd04791	LanC_SerThrkinase	2.50e-07	155	312	94	257	Lanthionine synthetase C-like domain associated with serine/threonine kinases. Some members of this subgroup lack the zinc binding site and the active site residues, and therefore are most likely inactive. The function of this domain is unknown.
COG1331	YyaL	4.91e-05	160	276	425	558	Uncharacterized conserved protein YyaL, SSP411 family, contains thoiredoxin and six-hairpin glycosidase-like domains [General function prediction only].
COG1331	YyaL	0.006	202	295	419	510	Uncharacterized conserved protein YyaL, SSP411 family, contains thoiredoxin and six-hairpin glycosidase-like domains [General function prediction only].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AGC67292.1	0.0	1	657	1	651
AGI38357.1	0.0	1	657	1	651
ANX00320.1	0.0	1	657	1	651
ANW97794.1	0.0	1	657	1	651
QOV18624.1	2.46e-283	1	655	1	649

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5MQO_A	1.20e-173	2	656	25	697	Glycosidehydrolase BT_1003 [Bacteroides thetaiotaomicron]
4QJY_A	1.27e-104	21	653	16	645	Crystalstructure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QJY_B Crystal structure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
4QK0_A	3.30e-100	21	653	16	645	Crystalstructure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_B Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_C Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_D Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
6EX6_A	1.17e-95	13	655	7	625	TheGH127, Beta-arabinofuranosidase, BT3674 [Bacteroides thetaiotaomicron VPI-5482],6EX6_B The GH127, Beta-arabinofuranosidase, BT3674 [Bacteroides thetaiotaomicron VPI-5482]
7EXU_A	2.45e-82	53	656	51	659	ChainA, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
E8MGH8	2.86e-81	53	651	51	654	Non-reducing end beta-L-arabinofuranosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA1 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000055	0.000006	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002403_04994.