You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000002394_01342
You are here: Home > Sequence: MGYG000002394_01342
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Prevotella rara | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella rara | |||||||||||
| CAZyme ID | MGYG000002394_01342 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 74201; End: 76777 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH105 | 497 | 848 | 5e-107 | 0.9819277108433735 |
| GH28 | 68 | 444 | 1.2e-81 | 0.9261538461538461 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 1.00e-93 | 32 | 437 | 72 | 454 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| pfam07470 | Glyco_hydro_88 | 4.42e-89 | 478 | 849 | 1 | 342 | Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases. |
| COG4225 | YesR | 2.48e-78 | 504 | 848 | 34 | 355 | Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism]. |
| pfam00295 | Glyco_hydro_28 | 1.34e-25 | 70 | 411 | 1 | 274 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN03003 | PLN03003 | 3.57e-15 | 43 | 341 | 24 | 257 | Probable polygalacturonase At3g15720 |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| BCS86040.1 | 0.0 | 1 | 853 | 1 | 851 |
| AGB29347.1 | 0.0 | 2 | 849 | 3 | 853 |
| QIM09915.1 | 0.0 | 1 | 851 | 1 | 893 |
| QNT65241.1 | 0.0 | 2 | 850 | 3 | 871 |
| QVJ80657.1 | 0.0 | 5 | 853 | 7 | 880 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4WU0_A | 2.84e-86 | 476 | 849 | 2 | 361 | StructuralAnalysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824],4WU0_B Structural Analysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824] |
| 3JUR_A | 5.82e-81 | 21 | 467 | 2 | 434 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
| 5OLP_A | 3.04e-67 | 25 | 443 | 20 | 428 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
| 1NC5_A | 6.65e-51 | 503 | 847 | 38 | 365 | Structureof Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis] |
| 2GH4_A | 2.49e-50 | 503 | 847 | 28 | 355 | ChainA, Putative glycosyl hydrolase yteR [Bacillus subtilis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| O34559 | 3.64e-50 | 503 | 847 | 38 | 365 | Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1 |
| A7PZL3 | 1.26e-27 | 59 | 372 | 78 | 356 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
| P0A3U6 | 2.12e-27 | 638 | 845 | 20 | 227 | Protein Atu3128 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=Atu3128 PE=3 SV=1 |
| P0A3U7 | 2.12e-27 | 638 | 845 | 20 | 227 | 24.9 kDa protein in picA locus OS=Rhizobium radiobacter OX=358 PE=2 SV=1 |
| P15922 | 7.93e-21 | 41 | 476 | 150 | 586 | Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000380 | 0.998894 | 0.000165 | 0.000185 | 0.000161 | 0.000161 |