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CAZyme Information: MGYG000002394_00958

You are here: Home > Sequence: MGYG000002394_00958

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella rara
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella rara
CAZyme ID MGYG000002394_00958
CAZy Family CBM4
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
603 MGYG000002394_5|CGC1 66696.2 4.464
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002394 3788330 Isolate Russia Europe
Gene Location Start: 142454;  End: 144265  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 333 583 2.1e-53 0.6897689768976898
CBM4 165 292 2.6e-16 0.9841269841269841

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00633 Glyco_10 3.24e-50 330 581 48 263
Glycosyl hydrolase family 10.
pfam00331 Glyco_hydro_10 1.83e-44 330 583 90 310
Glycosyl hydrolase family 10.
COG3693 XynA 9.91e-39 330 588 113 344
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
pfam02018 CBM_4_9 9.35e-13 164 292 1 128
Carbohydrate binding domain. This family includes diverse carbohydrate binding domains.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT92890.1 1.06e-225 1 601 1 760
ALJ61540.1 4.27e-225 1 601 1 760
EDV05054.1 3.48e-186 1 599 1 767
QDO69424.1 1.97e-185 1 599 1 767
QCP72441.1 1.20e-166 1 601 1 785

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1CLX_A 1.41e-26 348 588 108 347
CatalyticCore Of Xylanase A [Cellvibrio japonicus],1CLX_B Catalytic Core Of Xylanase A [Cellvibrio japonicus],1CLX_C Catalytic Core Of Xylanase A [Cellvibrio japonicus],1CLX_D Catalytic Core Of Xylanase A [Cellvibrio japonicus]
1W2P_A 1.43e-26 348 588 109 348
The3-dimensional structure of a xylanase (Xyn10A) from Cellvibrio japonicus [Cellvibrio japonicus],1W2P_B The 3-dimensional structure of a xylanase (Xyn10A) from Cellvibrio japonicus [Cellvibrio japonicus]
1W32_A 1.94e-26 348 588 109 348
The3-dimensional structure of a thermostable mutant of a xylanase (Xyn10A) from Cellvibrio japonicus [Cellvibrio japonicus],1W32_B The 3-dimensional structure of a thermostable mutant of a xylanase (Xyn10A) from Cellvibrio japonicus [Cellvibrio japonicus]
1W2V_A 1.94e-26 348 588 109 348
The3-dimensional structure of a thermostable mutant of a xylanase (Xyn10A) from Cellvibrio japonicus [Cellvibrio japonicus],1W2V_B The 3-dimensional structure of a thermostable mutant of a xylanase (Xyn10A) from Cellvibrio japonicus [Cellvibrio japonicus]
1W3H_A 2.32e-26 348 588 120 359
The3-dimensional structure of a thermostable mutant of a xylanase (Xyn10A) from Cellvibrio japonicus [Cellvibrio japonicus],1W3H_B The 3-dimensional structure of a thermostable mutant of a xylanase (Xyn10A) from Cellvibrio japonicus [Cellvibrio japonicus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P14768 9.43e-25 348 588 372 611
Endo-1,4-beta-xylanase A OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=xynA PE=1 SV=2
P07528 2.63e-23 334 583 162 396
Endo-1,4-beta-xylanase A OS=Alkalihalobacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=xynA PE=1 SV=1
Q59675 1.17e-21 341 587 357 599
Endo-beta-1,4-xylanase Xyn10C OS=Cellvibrio japonicus OX=155077 GN=xyn10C PE=1 SV=2
O60206 1.45e-20 338 584 118 330
Endo-1,4-beta-xylanase OS=Agaricus bisporus OX=5341 GN=xlnA PE=2 SV=1
B7SIW2 5.93e-20 338 586 183 398
Endo-1,4-beta-xylanase C OS=Phanerodontia chrysosporium OX=2822231 GN=xynC PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000000 1.000048 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002394_00958.