CAZyme Information: MGYG000002390_00114

Basic Information

• Species: Ligilactobacillus agilis
• Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Ligilactobacillus; Ligilactobacillus agilis
• CAZyme ID: MGYG000002390_00114
• CAZy Family: GH23
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
211	MGYG000002390_9|CGC2	22181.1	4.4002

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002390	2133539	Isolate	not provided	not provided

• Gene Location: Start: 48806; End: 49441 Strand: +

Full Sequence      

MKLNKLLLSATAAAGFFAATTAVANADTVTVQAGDTVSEIADKYNTTVEEIQNLNQLENV
NLIYVGEELVVNTNGQAATTASSEAPAATATVSSQAPVQQTPAQPAVQQAPAQQQVASAP
AQQATSQQTYTAPAATSSDEASAREFIAARESGGSYSAANGQYYGKYQLSRSYLGGDLSA
ANQERVANNYVQSRYGSWTAAKNHWLQNGWY

Enzyme Prediction     

No EC number prediction in MGYG000002390_00114.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd00118	LysM	1.19e-12	28	71	2	45	Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
smart00257	LysM	3.68e-11	28	71	1	44	Lysin motif.
pfam01476	LysM	7.79e-10	29	71	1	42	LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known.
COG1388	LysM	9.16e-06	28	85	68	124	LysM repeat [Cell wall/membrane/envelope biogenesis].
PRK13914	PRK13914	1.23e-05	25	143	198	316	invasion associated endopeptidase.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ASR41392.1	2.68e-108	1	211	1	211
QLL78667.1	1.31e-54	1	211	1	217
AEN78870.1	2.16e-54	1	211	1	188
ADJ79132.1	2.64e-54	1	211	1	217
AIR10697.1	2.64e-54	1	211	1	217

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000278	0.998977	0.000178	0.000205	0.000183	0.000163

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002390_00114.