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CAZyme Information: MGYG000002377_01270

You are here: Home > Sequence: MGYG000002377_01270

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium_X cadaveris
Lineage Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium_X; Clostridium_X cadaveris
CAZyme ID MGYG000002377_01270
CAZy Family GH0
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
447 MGYG000002377_5|CGC1 50049.63 4.7325
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002377 3460249 Isolate not provided not provided
Gene Location Start: 75591;  End: 76934  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002377_01270.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01471 PG_binding_1 1.63e-12 335 396 1 57
Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.
COG3409 PGRP 5.37e-08 329 396 38 102
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
COG3409 PGRP 6.38e-07 325 398 116 185
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AWZ49621.1 3.98e-197 2 446 3 446
VTQ95559.1 5.25e-197 1 447 1 445
QAA30635.1 2.15e-195 4 447 5 451
QPJ86276.1 2.76e-193 1 444 1 440
QQA12469.1 3.52e-193 1 443 1 438

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000047 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002377_01270.