CAZyme Information: MGYG000002368_00510

Basic Information

• Species: Vibrio metoecus
• Lineage: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Vibrionaceae; Vibrio; Vibrio metoecus
• CAZyme ID: MGYG000002368_00510
• CAZy Family: GH2
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
803		92040.11	5.1885

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002368	3946363	Isolate	United States	North America

• Gene Location: Start: 197840; End: 200251 Strand: +

Full Sequence      

MTGCNLNGQWRLTSPQRPDISLPMTIPGDNVTALLAAHCIPDPYWGGNEAKVRWIEDVDW
QISREFVVDTSLLENDQLWLTLTRVDMFASLYINDVLALECSNQFAGYELDIKPYLTLGS
NALRMVFHRVLPEAEKRAAALPFPIPSAMGNNQLPHMNLVRKTQCHSGWDWGLCLMVSGI
YDPILLQPINHTRLKQLATEQCWQSDGSVIVTLAVEVETEQAANLMFTMADQQQTLVAEH
NGWVQCEFLIAQPKRWWPNGLGEPHLYAVSVASAEQTLQRKIGLRQLELNTTADERGSAM
EFVINGFPMMAKGANWIPLDAMPARENEARYRQRLQSAVEANMNMIRVWGGGQYESDTFY
NLCDELGLLVWQDMMFACSLYPSHTDFLREVEQELRWQIPRLREHPCVALWCGDNEVIGA
IGWYDESKQNRIKYTVNYDRLNRKIAEVIESLDAKRAFWPSSPCNGELDFGDAWHDDNKG
DMHFWDVWHSGKPFSAYRSVNPRFCSEFGFQSWPSLAEVKTFTPEHDFNITSQTFEQHQK
NPRGNSIITEMFTRYFRFPTGFEQMLYLSQVQQAIAIKTAVDHWRAISPVCRGILYWQLN
DLWPVSSWSSIEYSGRWKQLHYHAKRFFASQYLVFSEHSGGLTLHGLNDSRDSAEIDGRI
CLINWQGEVVEQWPLSATLLPNHNHALWQKNASLNLGQAGFLWVDVVIKNCGERLQNTYF
GTEELKSLPMENANIEVQQAGRFIRLSTDKPAFYVHLECEGGGRFSDSSFTLLPEQPFTV
EYLGEDAHTLASSLRVYHLNSEF

Enzyme Prediction     

No EC number prediction in MGYG000002368_00510.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH2	5	676	1e-89	0.6688829787234043

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG3250	LacZ	1.00e-115	6	777	15	785	Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam17753	Ig_mannosidase	1.09e-10	732	800	1	77	Ig-fold domain. This Ig-like fold domain is found in mannosidase enzymes.
pfam00703	Glyco_hydro_2	4.16e-06	192	285	1	106	Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
PRK10340	ebgA	1.57e-05	212	370	228	394	cryptic beta-D-galactosidase subunit alpha; Reviewed
pfam17786	Mannosidase_ig	0.005	640	720	1	85	Mannosidase Ig/CBM-like domain. This domain corresponds to domain 4 in the structure of Bacteroides thetaiotaomicron beta-mannosidase, BtMan2A. This domain has an Ig-like fold.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QXC58883.1	0.0	1	802	1	804
AOW82647.1	0.0	1	801	1	801
AYO23661.1	0.0	1	799	1	800
ANU36149.1	0.0	1	799	1	800
AYO11299.1	0.0	1	799	1	800

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
2VJX_A	4.02e-130	22	655	26	678	Structuraland biochemical evidence for a boat-like transition state in beta-mannosidases [Bacteroides thetaiotaomicron VPI-5482],2VJX_B Structural and biochemical evidence for a boat-like transition state in beta-mannosidases [Bacteroides thetaiotaomicron VPI-5482],2VL4_A Structural and biochemical evidence for a boat-like transition state in beta-mannosidases [Bacteroides thetaiotaomicron VPI-5482],2VL4_B Structural and biochemical evidence for a boat-like transition state in beta-mannosidases [Bacteroides thetaiotaomicron VPI-5482],2VMF_A Structural and biochemical evidence for a boat-like transition state in beta-mannosidases [Bacteroides thetaiotaomicron VPI-5482],2VMF_B Structural and biochemical evidence for a boat-like transition state in beta-mannosidases [Bacteroides thetaiotaomicron VPI-5482],2VO5_A Structural and biochemical evidence for a boat-like transition state in beta-mannosidases [Bacteroides thetaiotaomicron VPI-5482],2VO5_B Structural and biochemical evidence for a boat-like transition state in beta-mannosidases [Bacteroides thetaiotaomicron VPI-5482],2VOT_A Structural and biochemical evidence for a boat-like transition state in beta-mannosidases [Bacteroides thetaiotaomicron VPI-5482],2VOT_B Structural and biochemical evidence for a boat-like transition state in beta-mannosidases [Bacteroides thetaiotaomicron VPI-5482],2VQT_A Structural and biochemical evidence for a boat-like transition state in beta-mannosidases [Bacteroides thetaiotaomicron],2VQT_B Structural and biochemical evidence for a boat-like transition state in beta-mannosidases [Bacteroides thetaiotaomicron],2VR4_A Transition-state mimicry in mannoside hydrolysis: characterisation of twenty six inhibitors and insight into binding from linear free energy relationships and 3-D structure [Bacteroides thetaiotaomicron VPI-5482],2VR4_B Transition-state mimicry in mannoside hydrolysis: characterisation of twenty six inhibitors and insight into binding from linear free energy relationships and 3-D structure [Bacteroides thetaiotaomicron VPI-5482]
2JE8_A	4.23e-130	22	655	28	680	Structureof a beta-mannosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],2JE8_B Structure of a beta-mannosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482]
7OP6_A	4.34e-130	22	655	28	680	ChainA, Beta-mannosidase [Bacteroides thetaiotaomicron VPI-5482],7OP6_B Chain B, Beta-mannosidase [Bacteroides thetaiotaomicron VPI-5482],7OP7_A Chain A, Beta-mannosidase [Bacteroides thetaiotaomicron VPI-5482],7OP7_B Chain B, Beta-mannosidase [Bacteroides thetaiotaomicron VPI-5482]
6BYE_A	5.87e-130	1	799	3	850	Crystalstructure of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri in complex with mannose [Xanthomonas citri pv. citri str. 306],6BYE_B Crystal structure of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri in complex with mannose [Xanthomonas citri pv. citri str. 306]
6BYC_A	6.02e-130	1	799	3	850	Crystalstructure of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri [Xanthomonas citri pv. citri str. 306]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q4FZV0	1.08e-105	5	776	24	852	Beta-mannosidase OS=Rattus norvegicus OX=10116 GN=Manba PE=2 SV=1
Q8K2I4	7.58e-105	5	773	24	847	Beta-mannosidase OS=Mus musculus OX=10090 GN=Manba PE=1 SV=1
Q95327	5.79e-102	5	801	24	874	Beta-mannosidase OS=Capra hircus OX=9925 GN=MANBA PE=1 SV=1
Q29444	1.12e-101	5	801	24	874	Beta-mannosidase OS=Bos taurus OX=9913 GN=MANBA PE=1 SV=1
O00462	3.12e-99	5	649	24	709	Beta-mannosidase OS=Homo sapiens OX=9606 GN=MANBA PE=1 SV=3

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000025	0.000006	0.000002	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002368_00510.