CAZyme Information: MGYG000002367_00166

Basic Information

• Species: Pediococcus pentosaceus
• Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Pediococcus; Pediococcus pentosaceus
• CAZyme ID: MGYG000002367_00166
• CAZy Family: CBM50
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
445	MGYG000002367_1|CGC4	47943.67	3.4946

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002367	1751049	Isolate	China	Asia

• Gene Location: Start: 172939; End: 174276 Strand: +

Full Sequence      

MNKKRITGAALASALLFAPLAIQTSTAMADSFYTQQTNAERADITNWVANTTEDISNNIS
AQHIDTSNLHGNEYIIQWGDTLSGISDATGIPMAKLAYDNNIQNIDLIYAGDTLVLNRDG
EVPSDWHYYGDGVYVAKTKVTINNFVDNSHNTVNINVSPVSHEEASSSSKSKDDGNEYAS
DLDPDGKKGEADSDKDASKSSSDADRDADTDSSSDSKSGSKNHHSDSSDSKSDSDSDSEM
DESDFSDAVSDEVSSKLGLDDDKLTVDFTGKDDDDSDSDADSDDTSDDSDSDTEDVYDSD
QDVSTGSDKLTDENAEKLADKIVAQLKADGKTKDIDDADDVELTIEANDDDFSFNVTLTT
TDDDSDSDEDSNSDDSDADTDDEDTDSEDVDSSSDEGSDEDTDFDDESEDADTDTEDEDQ
NSSSDDEDSNNQVTTTDDENTDTEE

Enzyme Prediction     

No EC number prediction in MGYG000002367_00166.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd00118	LysM	2.55e-07	74	116	3	45	Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
smart00257	LysM	2.40e-06	73	116	1	44	Lysin motif.
pfam01476	LysM	3.29e-06	74	116	1	42	LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QHO67554.1	3.81e-184	1	350	1	350
QHM60306.1	5.65e-182	1	350	1	353
QGZ69342.1	9.08e-165	1	350	1	328
QHM65312.1	1.89e-163	1	350	1	328
QHM67031.1	1.89e-163	1	350	1	328

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000287	0.998976	0.000172	0.000202	0.000171	0.000158

TMHMM  Annotations     

start	end
7	29