CAZyme Information: MGYG000002342_01614

Basic Information

• Species: Acinetobacter variabilis
• Lineage: Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter variabilis
• CAZyme ID: MGYG000002342_01614
• CAZy Family: GH23
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1100	MGYG000002342_38|CGC1	118664.88	9.8733

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002342	3410950	Isolate	United States	North America

• Gene Location: Start: 12018; End: 15320 Strand: +

Full Sequence      

MYKPTAILWQPALPTFLKFSVLGTALASLGLTGCSSTQSATQKASSKQVGSQYLDASSLD
GLEDLLSATDMRAVEGDRLLILKHGDIWKRMTVGFKMDLNTWNPRIDAQRGWFISRQPYL
DRLSARASRYLYYTVKEAERRGMPTELALLPIIESSYDPAATSSAAAAGLWQFIPSTGRI
YGLKQTSLYDGRRDVVESTRAAYEFLGSLYNQFGSWELALASYNAGPGRIQQAINRNKAA
GLPTDYWSLKLPQETMNYVPRFLAVAQIVKNPGTYGVSLPPIANRPHFREVTVGAANLNE
IAAITGLSRAELYQLNPGHRGDRIDPESPRRILIPADLSPSIDGKLKKLQSSSSGLWAGT
VSNSPKTTTTVTPNPTVAPASTSTTIVPAKQTPPVLANTTAKTATATKAPTATTSPKPAT
TTPAAVSTTATPNLTAQTTKRISTPRGSEALAEFAAKSELPIPSAPRIPVAVTPVASVKP
IQVEPPITAAERQQIQKVVSAEEINKTVDELLQPVATAAEQAQVIEELKALAPAGTEIVD
PYDGKIKLTAIQTSQSIAEQQGKELTKGFSYPKEVAVNTSADSVEARLNQGKNYVKTDSE
VVVVAPKGKRSTYKVLPGDNLALIAAKNGVNWRDVAKWNQIDPNSTLYVGTTIYLYDANP
VQEVPKAREKPESYVVQANDSLTSVASQFGLSVKQLADYNDLSTTSGLFVGQKLSLKEST
SKAKVEDSKKVETAKVQTKSYTVKRGEYLKLIADRYALSNAELAALTPGLTAGSSLMVGQ
KINVPLNEVDELTASSKKTEKIEQKFENVKVDHTPTESYQVKRGETLYSIANQSKLTVSE
LAALNGLSANSGLRIGQTIKIPAGSQVPDSYTVQSGDTLTGIAAKYNLSMDQIANLNNIS
RSANVRVGQHLKLSGSPEPVQEVVTETQEKNVKSDTHIVKSGETLSSIARQYHLQLRYLA
DLNGLSTTSNVRIGQRLKINEDIQIAKKEPLVKVATKSASFKATESYTVKSGESLIAIAN
RVGVPVTDLASLNNLSPRAGLRVGQTLQLPKLVTEYKVKRGDTLIGLASRYGMATNELAE
MNELKPNTQLRIGDVIKVPN

Enzyme Prediction     

No EC number prediction in MGYG000002342_01614.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH23	131	272	8.7e-24	0.9185185185185185

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK10783	mltD	1.52e-76	26	335	8	311	membrane-bound lytic murein transglycosylase D; Provisional
cd16894	MltD-like	9.09e-58	139	267	2	129	Membrane-bound lytic murein transglycosylase D and similar proteins. Lytic transglycosylases (LT) catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc). Membrane-bound lytic murein transglycosylase D protein (MltD) family members may have one or more small LysM domains, which may contribute to peptidoglycan binding. Unlike the similar "goose-type" lysozymes, LTs also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL).
pfam01464	SLT	3.36e-22	136	241	3	110	Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems.
PRK06347	PRK06347	3.17e-21	819	1049	333	591	1,4-beta-N-acetylmuramoylhydrolase.
PRK06347	PRK06347	1.51e-18	674	913	333	591	1,4-beta-N-acetylmuramoylhydrolase.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QKW82507.1	0.0	1	1055	1	1055
AUX90007.1	0.0	1	1055	1	1055
BCT89712.1	0.0	1	1055	1	1056
QXR18482.1	0.0	1	1055	1	1055
QQN88972.1	0.0	1	1055	1	1055

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4B8V_A	1.61e-11	819	982	44	219	ChainA, Extracellular Protein 6 [Fulvia fulva],4B9H_A Chain A, Extracellular Protein 6 [Fulvia fulva]
6FBT_A	7.37e-07	114	268	432	591	ChainA, Lytic murein transglycosylase [Pseudomonas aeruginosa]
5OHU_A	7.56e-07	114	268	461	620	TheX-ray Structure of Lytic Transglycosylase Slt from Pseudomonas aeruginosa [Pseudomonas aeruginosa]
6FC4_A	1.68e-06	114	268	433	592	ChainA, Soluble lytic murein transglycosylase [Pseudomonas aeruginosa]
6FCQ_A	1.68e-06	114	268	432	591	ChainA, Soluble lytic murein transglycosylase [Pseudomonas aeruginosa],6FCR_A Chain A, Soluble lytic murein transglycosylase [Pseudomonas aeruginosa],6FCS_A Chain A, Soluble lytic murein transglycosylase [Pseudomonas aeruginosa],6FCU_A Chain A, Soluble lytic murein transglycosylase [Pseudomonas aeruginosa]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P0AEZ7	1.28e-59	26	335	8	308	Membrane-bound lytic murein transglycosylase D OS=Escherichia coli (strain K12) OX=83333 GN=mltD PE=1 SV=1
P0AEZ8	1.28e-59	26	335	8	308	Membrane-bound lytic murein transglycosylase D OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=mltD PE=3 SV=1
P32820	1.68e-28	124	296	19	188	Putative tributyltin chloride resistance protein OS=Alteromonas sp. (strain M-1) OX=29457 GN=tbtA PE=3 SV=1
P37710	6.40e-22	674	1049	363	736	Autolysin OS=Enterococcus faecalis (strain ATCC 700802 / V583) OX=226185 GN=EF_0799 PE=1 SV=2
Q49UX4	1.41e-19	818	980	28	194	N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41) OX=342451 GN=sle1 PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000123	0.002886	0.997002	0.000021	0.000005	0.000001

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002342_01614.