logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002310_03520

You are here: Home > Sequence: MGYG000002310_03520

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Microvirga massiliensis
Lineage Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Microvirga; Microvirga massiliensis
CAZyme ID MGYG000002310_03520
CAZy Family CBM50
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
486 MGYG000002310_5|CGC2 49469.75 8.4167
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002310 8892798 Isolate not provided not provided
Gene Location Start: 142606;  End: 144066  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002310_03520.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK11198 PRK11198 1.16e-11 425 479 93 147
LysM domain/BON superfamily protein; Provisional
COG1652 XkdP 4.25e-11 211 485 14 269
Nucleoid-associated protein YgaU, contains BON and LysM domains [Function unknown].
NF033163 lipo_LipL71 3.26e-09 436 484 416 466
lipoprotein LipL71. Members of this family are lipoprotein LipL71, also known as LruA, as described in Leptospira interrogans but found broadly in the genus Leptospira. Close homologs that are not lipoproteins by sequence are likely defective in their reported coding region.
PHA03247 PHA03247 2.30e-07 38 257 2726 2949
large tegument protein UL36; Provisional
PRK12323 PRK12323 2.58e-05 67 259 391 560
DNA polymerase III subunit gamma/tau.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ANY77500.1 1.94e-125 8 478 8 444
QFU17017.1 4.33e-116 1 478 1 445
QRM28074.1 1.05e-106 1 482 1 432
SHI17277.1 2.31e-86 6 480 4 389
APF37135.1 1.32e-85 91 478 105 479

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5FIM_A 7.01e-06 408 482 71 151
Thestructure of Kbp.K from E. coli [Escherichia coli],7PVC_A Chain A, Potassium binding protein Kbp [Escherichia coli K-12]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999517 0.000429 0.000034 0.000005 0.000002 0.000045

TMHMM  Annotations      download full data without filtering help

start end
9 31