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CAZyme Information: MGYG000002310_01823
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Microvirga massiliensis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Microvirga; Microvirga massiliensis | |||||||||||
| CAZyme ID | MGYG000002310_01823 | |||||||||||
| CAZy Family | CE11 | |||||||||||
| CAZyme Description | UDP-3-O-acyl-N-acetylglucosamine deacetylase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 785334; End: 786197 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE11 | 1 | 252 | 1.3e-96 | 0.9114391143911439 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK13186 | lpxC | 2.46e-149 | 1 | 269 | 26 | 290 | UDP-3-O-acyl-N-acetylglucosamine deacetylase. |
| pfam03331 | LpxC | 2.63e-139 | 1 | 253 | 23 | 271 | UDP-3-O-acyl N-acetylglycosamine deacetylase. The enzymes in this family catalyze the second step in the biosynthetic pathway for lipid A. |
| COG0774 | LpxC | 1.01e-127 | 1 | 273 | 26 | 297 | UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell wall/membrane/envelope biogenesis]. |
| TIGR00325 | lpxC | 2.01e-88 | 1 | 261 | 25 | 281 | UDP-3-0-acyl N-acetylglucosamine deacetylase. UDP-3-O-(R-3-hydroxymyristoyl)-GlcNAc deacetylase from E. coli , LpxC, was previously designated EnvA. This enzyme is involved in lipid-A precursor biosynthesis. It is essential for cell viability. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides] |
| PRK13188 | PRK13188 | 8.77e-72 | 1 | 244 | 27 | 291 | bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AWM89026.1 | 3.95e-175 | 1 | 287 | 28 | 315 |
| QFU17122.1 | 2.28e-174 | 1 | 287 | 28 | 315 |
| QRM30842.1 | 8.95e-174 | 1 | 287 | 28 | 314 |
| ANY80075.1 | 1.41e-170 | 1 | 287 | 28 | 314 |
| APF38069.1 | 3.47e-148 | 1 | 287 | 28 | 315 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3NZK_A | 2.65e-68 | 1 | 261 | 31 | 290 | Structureof LpxC from Yersinia enterocolitica Complexed with CHIR090 Inhibitor [Yersinia enterocolitica],3NZK_B Structure of LpxC from Yersinia enterocolitica Complexed with CHIR090 Inhibitor [Yersinia enterocolitica] |
| 4MDT_A | 1.00e-66 | 1 | 261 | 26 | 285 | Structureof LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine [Escherichia coli],4MDT_B Structure of LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine [Escherichia coli],4MDT_C Structure of LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine [Escherichia coli],4MDT_D Structure of LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine [Escherichia coli] |
| 3P3G_A | 1.22e-66 | 1 | 261 | 26 | 285 | CrystalStructure of the Escherichia coli LpxC/LPC-009 complex [Escherichia coli IHE3034],3PS1_A Crystal structure of the Escherichia Coli LPXC/LPC-011 complex [Escherichia coli IHE3034],3PS2_A Crystal structure of the Escherichia Coli LPXC/LPC-012 complex [Escherichia coli IHE3034],3PS3_A Crystal structure of the Escherichia Coli LPXC/LPC-053 complex [Escherichia coli IHE3034],4IS9_A Crystal Structure of the Escherichia coli LpxC/L-161,240 complex [Escherichia coli IHE3034],4IS9_B Crystal Structure of the Escherichia coli LpxC/L-161,240 complex [Escherichia coli IHE3034],4ISA_A Crystal Structure of the Escherichia coli LpxC/BB-78485 complex [Escherichia coli IHE3034] |
| 4MQY_A | 1.41e-66 | 1 | 261 | 26 | 285 | CrystalStructure of the Escherichia coli LpxC/LPC-138 complex [Escherichia coli] |
| 5U39_A | 1.34e-64 | 1 | 269 | 28 | 294 | Pseudomonasaeruginosa LpxC in complex with CHIR-090 [Pseudomonas aeruginosa PAO1] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| B2S6P7 | 6.10e-90 | 3 | 262 | 29 | 285 | UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Brucella abortus (strain S19) OX=430066 GN=lpxC PE=3 SV=1 |
| A5VRG8 | 6.10e-90 | 3 | 262 | 29 | 285 | UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) OX=444178 GN=lpxC PE=3 SV=1 |
| C0RE63 | 6.10e-90 | 3 | 262 | 29 | 285 | UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Brucella melitensis biotype 2 (strain ATCC 23457) OX=546272 GN=lpxC PE=3 SV=1 |
| Q2YLZ2 | 6.10e-90 | 3 | 262 | 29 | 285 | UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Brucella abortus (strain 2308) OX=359391 GN=lpxC PE=3 SV=1 |
| B0CHL2 | 6.10e-90 | 3 | 262 | 29 | 285 | UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) OX=470137 GN=lpxC PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.999984 | 0.000076 | 0.000001 | 0.000000 | 0.000000 | 0.000000 |