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CAZyme Information: MGYG000002303_01803
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Ruminococcus_E sp003438075 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; Ruminococcus_E; Ruminococcus_E sp003438075 | |||||||||||
| CAZyme ID | MGYG000002303_01803 | |||||||||||
| CAZy Family | CBM74 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 100099; End: 102312 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CBM74 | 241 | 567 | 1.8e-129 | 0.9967948717948718 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam16738 | CBM26 | 5.55e-11 | 37 | 93 | 1 | 59 | Starch-binding module 26. CBM26 is a carbohydrate-binding module that binds starch. |
| cd14256 | Dockerin_I | 1.56e-08 | 675 | 737 | 1 | 57 | Type I dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I dockerins, which are responsible for anchoring a variety of enzymatic domains to the complex. |
| pfam00404 | Dockerin_1 | 8.71e-06 | 676 | 736 | 1 | 55 | Dockerin type I repeat. The dockerin repeat is the binding partner of the cohesin domain pfam00963. The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome. The dockerin repeats, each bearing homology to the EF-hand calcium-binding loop bind calcium. |
| PRK14081 | PRK14081 | 4.05e-04 | 585 | 653 | 293 | 365 | triple tyrosine motif-containing protein; Provisional |
| cd14254 | Dockerin_II | 0.001 | 676 | 733 | 1 | 50 | Type II dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type II dockerins, which are responsible for mediating attachment of the cellulosome complex to the bacterial cell wall. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QCT06902.1 | 0.0 | 1 | 696 | 1 | 693 |
| CDM67953.1 | 1.44e-107 | 46 | 673 | 583 | 1190 |
| AWX97480.1 | 1.61e-80 | 37 | 697 | 554 | 1184 |
| AWX95531.1 | 1.61e-80 | 37 | 697 | 554 | 1184 |
| QCT07491.1 | 1.73e-68 | 26 | 571 | 25 | 528 |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.001076 | 0.997975 | 0.000265 | 0.000292 | 0.000198 | 0.000180 |
