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CAZyme Information: MGYG000002283_00879

You are here: Home > Sequence: MGYG000002283_00879

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacillus_A paranthracis
Lineage Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae_G; Bacillus_A; Bacillus_A paranthracis
CAZyme ID MGYG000002283_00879
CAZy Family GH129
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
765 MGYG000002283_1|CGC8 88493.6 8.0851
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002283 5102264 Isolate China Asia
Gene Location Start: 855737;  End: 858034  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002283_00879.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH129 423 757 4.7e-40 0.46440129449838186

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam11308 Glyco_hydro_129 0.0 397 722 1 323
Glycosyl hydrolases related to GH101 family, GH129. This family of bacterial and lower eukaryote glycosyl hydrolases is related to CAZy family GH129,and distantly to GH101, and is made up of sub-families GHL1-GHL3.
pfam01193 RNA_pol_L 0.004 21 112 73 174
RNA polymerase Rpb3/Rpb11 dimerization domain. The two eukaryotic subunits Rpb3 and Rpb11 dimerize to from a platform onto which the other subunits of the RNA polymerase assemble (D/L in archaea). The prokaryotic equivalent of the Rpb3/Rpb11 platform is the alpha-alpha dimer. The dimerization domain of the alpha subunit/Rpb3 is interrupted by an insert domain (pfam01000). Some of the alpha subunits also contain iron-sulphur binding domains (pfam00037). Rpb11 is found as a continuous domain. Members of this family include: alpha subunit from eubacteria, alpha subunits from chloroplasts, Rpb3 subunits from eukaryotes, Rpb11 subunits from eukaryotes, RpoD subunits from archaeal spp, and RpoL subunits from archaeal spp.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QPI83481.1 0.0 1 765 1 765
QHH84521.1 0.0 1 765 1 765
ASZ18262.1 0.0 1 765 1 765
QGG19984.1 0.0 1 765 1 765
QRH06357.1 0.0 1 765 1 765

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000000 1.000076 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002283_00879.