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CAZyme Information: MGYG000002273_02403

You are here: Home > Sequence: MGYG000002273_02403

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides stercorirosoris
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides stercorirosoris
CAZyme ID MGYG000002273_02403
CAZy Family PL10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
707 81053.2 8.1656
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002273 6091524 Isolate China Asia
Gene Location Start: 116122;  End: 118245  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002273_02403.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL10 61 352 2e-115 0.9965277777777778
CE8 405 638 5.5e-29 0.7916666666666666

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam09492 Pec_lyase 2.00e-161 61 353 1 289
Pectic acid lyase. Members of this family are isozymes of pectate lyase (EC:4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase.
TIGR02474 pec_lyase 2.19e-113 61 352 1 289
pectate lyase, PelA/Pel-15E family. Members of this family are isozymes of pectate lyase (EC 4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase. [Energy metabolism, Biosynthesis and degradation of polysaccharides]
pfam01095 Pectinesterase 5.66e-06 398 455 1 65
Pectinesterase.
COG4677 PemB 2.14e-05 406 628 96 352
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
PLN02432 PLN02432 1.00e-04 405 677 24 279
putative pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ALJ61703.1 0.0 1 707 1 707
QUT92735.1 0.0 1 706 1 706
QJR78975.1 0.0 34 707 40 713
QJR66036.1 0.0 34 707 40 713
QJR70737.1 0.0 34 707 40 713

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1R76_A 3.34e-55 44 359 77 404
ChainA, pectate lyase [Niveispirillum irakense]
1GXM_A 2.21e-52 57 355 40 325
Family10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXM_B Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXN_A Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus]
1GXO_A 2.95e-51 57 355 40 325
MutantD189A of Family 10 polysaccharide lyase from Cellvibrio cellulosa in complex with trigalaturonic acid [Cellvibrio japonicus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000290 0.999092 0.000180 0.000157 0.000132 0.000128

TMHMM  Annotations      download full data without filtering help

start end
12 29