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CAZyme Information: MGYG000002256_01960

You are here: Home > Sequence: MGYG000002256_01960

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; UBA3282;
CAZyme ID MGYG000002256_01960
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
945 MGYG000002256_65|CGC1 107004.37 4.8846
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002256 2755304 MAG Peru South America
Gene Location Start: 1920;  End: 4757  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002256_01960.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 3 453 6.9e-59 0.4867021276595745

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3250 LacZ 1.30e-19 1 561 9 533
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10340 ebgA 1.14e-11 96 405 140 449
cryptic beta-D-galactosidase subunit alpha; Reviewed
PRK10150 PRK10150 3.69e-11 6 405 14 417
beta-D-glucuronidase; Provisional
PRK09525 lacZ 6.41e-11 96 405 152 462
beta-galactosidase.
pfam02837 Glyco_hydro_2_N 5.04e-09 7 135 4 135
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
VCV21593.1 0.0 1 931 1 941
CBL14176.1 0.0 1 931 1 941
ADD61823.1 0.0 1 931 8 948
BCN29348.1 3.48e-312 3 937 2 979
QEH68830.1 1.08e-308 1 935 1 925

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1F4A_A 8.05e-12 96 405 149 459
E.COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) [Escherichia coli],1F4A_B E. COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) [Escherichia coli],1F4A_C E. COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) [Escherichia coli],1F4A_D E. COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) [Escherichia coli],1F4H_A E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) [Escherichia coli],1F4H_B E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) [Escherichia coli],1F4H_C E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) [Escherichia coli],1F4H_D E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) [Escherichia coli]
5A1A_A 8.05e-12 96 405 150 460
2.2A resolution cryo-EM structure of beta-galactosidase in complex with a cell-permeant inhibitor [Escherichia coli K-12],5A1A_B 2.2 A resolution cryo-EM structure of beta-galactosidase in complex with a cell-permeant inhibitor [Escherichia coli K-12],5A1A_C 2.2 A resolution cryo-EM structure of beta-galactosidase in complex with a cell-permeant inhibitor [Escherichia coli K-12],5A1A_D 2.2 A resolution cryo-EM structure of beta-galactosidase in complex with a cell-permeant inhibitor [Escherichia coli K-12]
3J7H_A 8.06e-12 96 405 152 462
Structureof beta-galactosidase at 3.2-A resolution obtained by cryo-electron microscopy [Escherichia coli K-12],3J7H_B Structure of beta-galactosidase at 3.2-A resolution obtained by cryo-electron microscopy [Escherichia coli K-12],3J7H_C Structure of beta-galactosidase at 3.2-A resolution obtained by cryo-electron microscopy [Escherichia coli K-12],3J7H_D Structure of beta-galactosidase at 3.2-A resolution obtained by cryo-electron microscopy [Escherichia coli K-12],4CKD_A Model of complex between the E.coli enzyme beta-galactosidase and four single chain Fv antibody domains scFv13R4. [Escherichia coli K-12],4CKD_B Model of complex between the E.coli enzyme beta-galactosidase and four single chain Fv antibody domains scFv13R4. [Escherichia coli K-12],4CKD_C Model of complex between the E.coli enzyme beta-galactosidase and four single chain Fv antibody domains scFv13R4. [Escherichia coli K-12],4CKD_D Model of complex between the E.coli enzyme beta-galactosidase and four single chain Fv antibody domains scFv13R4. [Escherichia coli K-12],6DRV_A Beta-galactosidase [Escherichia coli K-12],6DRV_B Beta-galactosidase [Escherichia coli K-12],6DRV_C Beta-galactosidase [Escherichia coli K-12],6DRV_D Beta-galactosidase [Escherichia coli K-12]
3MUY_1 8.06e-12 96 405 151 461
Chain1, Beta-D-galactosidase [Escherichia coli K-12],3MUY_2 Chain 2, Beta-D-galactosidase [Escherichia coli K-12],3MUY_3 Chain 3, Beta-D-galactosidase [Escherichia coli K-12],3MUY_4 Chain 4, Beta-D-galactosidase [Escherichia coli K-12]
4V41_A 8.06e-12 96 405 151 461
E.COLI (LAC Z) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-MONOCLINIC) [Escherichia coli BL21],4V41_B E. COLI (LAC Z) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-MONOCLINIC) [Escherichia coli BL21],4V41_C E. COLI (LAC Z) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-MONOCLINIC) [Escherichia coli BL21],4V41_D E. COLI (LAC Z) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-MONOCLINIC) [Escherichia coli BL21],4V41_E E. COLI (LAC Z) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-MONOCLINIC) [Escherichia coli BL21],4V41_F E. COLI (LAC Z) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-MONOCLINIC) [Escherichia coli BL21],4V41_G E. COLI (LAC Z) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-MONOCLINIC) [Escherichia coli BL21],4V41_H E. COLI (LAC Z) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-MONOCLINIC) [Escherichia coli BL21],4V41_I E. COLI (LAC Z) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-MONOCLINIC) [Escherichia coli BL21],4V41_J E. COLI (LAC Z) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-MONOCLINIC) [Escherichia coli BL21],4V41_K E. COLI (LAC Z) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-MONOCLINIC) [Escherichia coli BL21],4V41_L E. COLI (LAC Z) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-MONOCLINIC) [Escherichia coli BL21],4V41_M E. COLI (LAC Z) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-MONOCLINIC) [Escherichia coli BL21],4V41_N E. COLI (LAC Z) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-MONOCLINIC) [Escherichia coli BL21],4V41_O E. COLI (LAC Z) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-MONOCLINIC) [Escherichia coli BL21],4V41_P E. COLI (LAC Z) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-MONOCLINIC) [Escherichia coli BL21],4V44_A E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH 2-F-LACTOSE [Escherichia coli],4V44_B E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH 2-F-LACTOSE [Escherichia coli],4V44_C E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH 2-F-LACTOSE [Escherichia coli],4V44_D E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH 2-F-LACTOSE [Escherichia coli],4V44_E E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH 2-F-LACTOSE [Escherichia coli],4V44_F E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH 2-F-LACTOSE [Escherichia coli],4V44_G E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH 2-F-LACTOSE [Escherichia coli],4V44_H E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH 2-F-LACTOSE [Escherichia coli],4V44_I E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH 2-F-LACTOSE [Escherichia coli],4V44_J E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH 2-F-LACTOSE [Escherichia coli],4V44_K E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH 2-F-LACTOSE [Escherichia coli],4V44_L E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH 2-F-LACTOSE [Escherichia coli],4V44_M E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH 2-F-LACTOSE [Escherichia coli],4V44_N E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH 2-F-LACTOSE [Escherichia coli],4V44_O E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH 2-F-LACTOSE [Escherichia coli],4V44_P E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH 2-F-LACTOSE [Escherichia coli],4V45_A E. COLI (lacZ) BETA-GALACTOSIDASE-TRAPPED 2-F-GALACTOSYL-ENZYME INTERMEDIATE [Escherichia coli],4V45_B E. COLI (lacZ) BETA-GALACTOSIDASE-TRAPPED 2-F-GALACTOSYL-ENZYME INTERMEDIATE [Escherichia coli],4V45_C E. COLI (lacZ) BETA-GALACTOSIDASE-TRAPPED 2-F-GALACTOSYL-ENZYME INTERMEDIATE [Escherichia coli],4V45_D E. COLI (lacZ) BETA-GALACTOSIDASE-TRAPPED 2-F-GALACTOSYL-ENZYME INTERMEDIATE [Escherichia coli],4V45_E E. COLI (lacZ) BETA-GALACTOSIDASE-TRAPPED 2-F-GALACTOSYL-ENZYME INTERMEDIATE [Escherichia coli],4V45_F E. COLI (lacZ) BETA-GALACTOSIDASE-TRAPPED 2-F-GALACTOSYL-ENZYME INTERMEDIATE [Escherichia coli],4V45_G E. COLI (lacZ) BETA-GALACTOSIDASE-TRAPPED 2-F-GALACTOSYL-ENZYME INTERMEDIATE [Escherichia coli],4V45_H E. COLI (lacZ) BETA-GALACTOSIDASE-TRAPPED 2-F-GALACTOSYL-ENZYME INTERMEDIATE [Escherichia coli],4V45_I E. COLI (lacZ) BETA-GALACTOSIDASE-TRAPPED 2-F-GALACTOSYL-ENZYME INTERMEDIATE [Escherichia coli],4V45_J E. COLI (lacZ) BETA-GALACTOSIDASE-TRAPPED 2-F-GALACTOSYL-ENZYME INTERMEDIATE [Escherichia coli],4V45_K E. COLI (lacZ) BETA-GALACTOSIDASE-TRAPPED 2-F-GALACTOSYL-ENZYME INTERMEDIATE [Escherichia coli],4V45_L E. COLI (lacZ) BETA-GALACTOSIDASE-TRAPPED 2-F-GALACTOSYL-ENZYME INTERMEDIATE [Escherichia coli],4V45_M E. COLI (lacZ) BETA-GALACTOSIDASE-TRAPPED 2-F-GALACTOSYL-ENZYME INTERMEDIATE [Escherichia coli],4V45_N E. COLI (lacZ) BETA-GALACTOSIDASE-TRAPPED 2-F-GALACTOSYL-ENZYME INTERMEDIATE [Escherichia coli],4V45_O E. COLI (lacZ) BETA-GALACTOSIDASE-TRAPPED 2-F-GALACTOSYL-ENZYME INTERMEDIATE [Escherichia coli],4V45_P E. COLI (lacZ) BETA-GALACTOSIDASE-TRAPPED 2-F-GALACTOSYL-ENZYME INTERMEDIATE [Escherichia coli]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q6LL68 5.48e-15 3 405 45 456
Beta-galactosidase OS=Photobacterium profundum (strain SS9) OX=298386 GN=lacZ PE=3 SV=1
A8AKB8 2.89e-12 3 405 51 462
Beta-galactosidase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) OX=290338 GN=lacZ PE=3 SV=1
Q8D4H3 3.81e-12 3 405 46 458
Beta-galactosidase OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=lacZ PE=3 SV=2
Q47077 8.62e-12 3 405 52 463
Beta-galactosidase OS=Enterobacter cloacae OX=550 GN=lacZ PE=3 SV=1
B1J0T5 1.48e-11 96 405 152 462
Beta-galactosidase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks) OX=481805 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999981 0.000031 0.000011 0.000000 0.000000 0.000005

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002256_01960.