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CAZyme Information: MGYG000002216_01389

You are here: Home > Sequence: MGYG000002216_01389

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; ;
CAZyme ID MGYG000002216_01389
CAZy Family GH146
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1016 MGYG000002216_35|CGC1 114753.93 4.7286
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002216 3003083 MAG Spain Europe
Gene Location Start: 2915;  End: 5965  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002216_01389.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH146 261 581 7.5e-56 0.610337972166998

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07944 Glyco_hydro_127 8.31e-53 261 717 21 501
Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.
COG3533 COG3533 1.99e-26 248 784 22 571
Uncharacterized conserved protein, DUF1680 family [Function unknown].
pfam13385 Laminin_G_3 9.86e-19 90 244 4 150
Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BBF45278.1 5.34e-162 4 1015 10 1378
AET60941.1 2.84e-47 250 718 208 708
AKA69367.1 1.48e-46 261 726 667 1165
AWI04506.1 4.53e-46 261 743 667 1181
ASR47498.1 3.05e-45 263 724 221 716

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
E8MGH9 5.76e-07 875 995 1164 1285
Beta-L-arabinobiosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001866 0.689042 0.307248 0.000830 0.000556 0.000434

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002216_01389.