You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000002140_02546
You are here: Home > Sequence: MGYG000002140_02546
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | CAG-510 sp900551115 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; CAG-510; CAG-510 sp900551115 | |||||||||||
| CAZyme ID | MGYG000002140_02546 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 36594; End: 38147 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 105 | 473 | 9.9e-74 | 0.9323076923076923 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 5.83e-105 | 50 | 505 | 49 | 536 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| PLN03003 | PLN03003 | 7.67e-29 | 82 | 469 | 24 | 367 | Probable polygalacturonase At3g15720 |
| pfam00295 | Glyco_hydro_28 | 3.20e-28 | 184 | 467 | 48 | 312 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN02218 | PLN02218 | 4.24e-28 | 81 | 459 | 67 | 408 | polygalacturonase ADPG |
| PLN02188 | PLN02188 | 1.17e-24 | 81 | 397 | 36 | 326 | polygalacturonase/glycoside hydrolase family protein |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QNM03367.1 | 2.25e-295 | 1 | 513 | 1 | 513 |
| VCV21973.1 | 1.74e-264 | 1 | 507 | 1 | 508 |
| CBL09361.1 | 1.74e-264 | 1 | 507 | 1 | 508 |
| CBL11994.1 | 2.47e-264 | 1 | 507 | 1 | 508 |
| AEN96748.1 | 8.90e-253 | 1 | 517 | 1 | 518 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3JUR_A | 7.38e-37 | 82 | 462 | 28 | 413 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
| 5OLP_A | 6.44e-28 | 71 | 479 | 37 | 445 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
| 1BHE_A | 3.79e-27 | 98 | 460 | 26 | 362 | ChainA, POLYGALACTURONASE [Pectobacterium carotovorum] |
| 2UVE_A | 1.26e-23 | 48 | 411 | 117 | 516 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
| 4MR0_A | 7.71e-10 | 73 | 243 | 107 | 264 | Crystalstructure of PfbA, a surface adhesin of Streptococcus pneumoniae [Streptococcus pneumoniae R6],4MR0_B Crystal structure of PfbA, a surface adhesin of Streptococcus pneumoniae [Streptococcus pneumoniae R6] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P27644 | 1.92e-56 | 227 | 485 | 27 | 287 | Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1 |
| A7PZL3 | 1.29e-42 | 81 | 500 | 62 | 471 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
| Q9LW07 | 3.76e-29 | 82 | 462 | 24 | 360 | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1 |
| P15922 | 4.42e-27 | 50 | 411 | 114 | 509 | Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1 |
| P18192 | 8.78e-27 | 98 | 460 | 52 | 388 | Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=peh PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000035 | 0.000013 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |