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CAZyme Information: MGYG000002051_01115
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Prevotella sp900546345 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900546345 | |||||||||||
| CAZyme ID | MGYG000002051_01115 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | Endo-polygalacturonase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 21902; End: 23221 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 48 | 398 | 3.4e-69 | 0.9323076923076923 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 9.26e-68 | 16 | 310 | 75 | 396 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| PLN02188 | PLN02188 | 6.13e-24 | 3 | 395 | 4 | 377 | polygalacturonase/glycoside hydrolase family protein |
| PLN02793 | PLN02793 | 1.29e-23 | 20 | 310 | 49 | 328 | Probable polygalacturonase |
| PLN02218 | PLN02218 | 1.20e-21 | 20 | 310 | 64 | 343 | polygalacturonase ADPG |
| PLN03010 | PLN03010 | 1.30e-19 | 11 | 309 | 34 | 307 | polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AGB27557.1 | 3.50e-241 | 1 | 438 | 1 | 439 |
| BCS85558.1 | 6.71e-200 | 27 | 416 | 1 | 390 |
| ADY36938.1 | 8.63e-200 | 24 | 417 | 31 | 424 |
| QVJ79670.1 | 4.86e-194 | 14 | 417 | 15 | 417 |
| ADE82966.1 | 1.39e-193 | 14 | 417 | 15 | 417 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5OLP_A | 1.03e-28 | 24 | 335 | 45 | 390 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
| 3JUR_A | 4.28e-22 | 17 | 304 | 21 | 343 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
| 1BHE_A | 5.73e-19 | 32 | 392 | 19 | 361 | ChainA, POLYGALACTURONASE [Pectobacterium carotovorum] |
| 2UVE_A | 6.63e-18 | 26 | 418 | 159 | 580 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
| 4MXN_A | 2.16e-16 | 19 | 253 | 17 | 235 | Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A7PZL3 | 9.35e-25 | 26 | 315 | 65 | 364 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
| Q8RY29 | 7.61e-20 | 23 | 310 | 67 | 343 | Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2 |
| P18192 | 1.46e-19 | 32 | 392 | 45 | 387 | Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=peh PE=3 SV=1 |
| P26509 | 3.91e-18 | 32 | 392 | 45 | 387 | Endo-polygalacturonase OS=Pectobacterium parmentieri OX=1905730 GN=pehA PE=1 SV=1 |
| Q9LW07 | 9.88e-18 | 20 | 369 | 20 | 332 | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000219 | 0.999150 | 0.000171 | 0.000165 | 0.000141 | 0.000139 |