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CAZyme Information: MGYG000001944_01290

You are here: Home > Sequence: MGYG000001944_01290

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Selenomonas_C sp002351185
Lineage Bacteria; Firmicutes_C; Negativicutes; Selenomonadales; Selenomonadaceae; Selenomonas_C; Selenomonas_C sp002351185
CAZyme ID MGYG000001944_01290
CAZy Family GH9
CAZyme Description Endoglucanase D
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
596 MGYG000001944_104|CGC1 65108.63 7.4903
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001944 2012593 MAG Denmark Europe
Gene Location Start: 3465;  End: 5255  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001944_01290.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH9 131 581 8.8e-91 0.992822966507177

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00759 Glyco_hydro_9 7.84e-67 146 581 14 374
Glycosyl hydrolase family 9.
cd02850 E_set_Cellulase_N 1.71e-27 44 126 2 86
N-terminal Early set domain associated with the catalytic domain of cellulase. E or "early" set domains are associated with the catalytic domain of cellulases at the N-terminal end. Cellulases are O-glycosyl hydrolases (GHs) that hydrolyze beta 1-4 glucosidic bonds in cellulose. They are usually categorized into either exoglucanases, which sequentially release terminal sugar units from the cellulose chain, or endoglucanases, which also attack the chain internally. The N-terminal domain of cellulase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others.
pfam02927 CelD_N 1.13e-23 46 121 5 83
Cellulase N-terminal ig-like domain.
PLN03009 PLN03009 2.59e-12 185 515 70 414
cellulase
PLN02613 PLN02613 2.98e-12 181 515 64 403
endoglucanase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SNV04832.1 3.22e-279 39 587 29 578
BAL82172.1 2.00e-277 7 596 5 587
QIB59262.1 3.41e-274 4 596 2 587
BDA09401.1 3.95e-273 39 596 29 587
CBL06693.1 1.72e-271 4 596 2 587

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5U0H_A 4.41e-162 66 586 17 541
Crystalstructure of GH family 9 endoglucanase J30 [Thermobacillus composti KWC4]
5U2O_A 1.10e-159 66 586 17 541
Crystalstructure of Zn-binding triple mutant of GH family 9 endoglucanase J30 [Thermobacillus composti KWC4]
3X17_A 6.08e-112 46 585 20 557
Crystalstructure of metagenome-derived glycoside hydrolase family 9 endoglucanase [uncultured bacterium],3X17_B Crystal structure of metagenome-derived glycoside hydrolase family 9 endoglucanase [uncultured bacterium]
4CJ0_A 1.09e-71 41 584 27 547
ChainA, ENDOGLUCANASE D [Acetivibrio thermocellus],4CJ1_A Chain A, ENDOGLUCANASE D [Acetivibrio thermocellus]
1CLC_A 1.45e-71 41 584 41 561
ChainA, ENDOGLUCANASE CELD; EC: 3.2.1.4 [Acetivibrio thermocellus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P0C2S4 5.95e-71 41 584 27 547
Endoglucanase D (Fragment) OS=Acetivibrio thermocellus OX=1515 GN=celD PE=1 SV=1
A3DDN1 9.69e-71 41 584 51 571
Endoglucanase D OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=celD PE=1 SV=1
P23658 1.30e-63 46 582 6 543
Cellodextrinase OS=Butyrivibrio fibrisolvens OX=831 GN=ced1 PE=1 SV=1
A7LXT3 1.09e-59 40 582 28 576
Xyloglucan-specific endo-beta-1,4-glucanase BoGH9A OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02649 PE=1 SV=1
Q05156 2.65e-58 40 586 179 744
Cellulase 1 OS=Streptomyces reticuli OX=1926 GN=cel1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000422 0.665954 0.332605 0.000498 0.000285 0.000198

TMHMM  Annotations      download full data without filtering help

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