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CAZyme Information: MGYG000001940_00507
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Ruminococcus sp002438605 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus; Ruminococcus sp002438605 | |||||||||||
| CAZyme ID | MGYG000001940_00507 | |||||||||||
| CAZy Family | GH11 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 16234; End: 18921 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH10 | 455 | 778 | 1.7e-93 | 0.9900990099009901 |
| GH11 | 47 | 235 | 8.1e-73 | 0.9887005649717514 |
| CBM22 | 270 | 398 | 8.3e-34 | 0.9694656488549618 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00331 | Glyco_hydro_10 | 1.61e-101 | 455 | 778 | 1 | 310 | Glycosyl hydrolase family 10. |
| smart00633 | Glyco_10 | 1.27e-92 | 494 | 776 | 1 | 263 | Glycosyl hydrolase family 10. |
| pfam00457 | Glyco_hydro_11 | 2.99e-77 | 47 | 234 | 1 | 175 | Glycosyl hydrolases family 11. |
| COG3693 | XynA | 2.81e-67 | 482 | 780 | 55 | 341 | Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism]. |
| pfam02018 | CBM_4_9 | 1.70e-23 | 267 | 402 | 1 | 134 | Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ADU24192.1 | 7.22e-224 | 30 | 779 | 32 | 785 |
| CBL18305.1 | 5.17e-174 | 17 | 417 | 13 | 405 |
| CAA77476.1 | 9.85e-174 | 35 | 781 | 27 | 954 |
| AAS31752.1 | 9.85e-174 | 35 | 781 | 27 | 954 |
| CAL91982.1 | 1.95e-171 | 455 | 782 | 11 | 337 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2W5F_A | 3.37e-99 | 272 | 779 | 27 | 527 | ChainA, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2W5F_B Chain B, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus] |
| 2WYS_A | 3.76e-96 | 272 | 779 | 27 | 527 | ChainA, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2WYS_B Chain B, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2WZE_A Chain A, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2WZE_B Chain B, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus] |
| 7AYL_A | 2.68e-94 | 28 | 243 | 22 | 230 | Crystalstructure of the GH11 domain of a multidomain xylanase from the hindgut metagenome of Trinervitermes trinervoides [uncultured bacterium],7AYL_B Crystal structure of the GH11 domain of a multidomain xylanase from the hindgut metagenome of Trinervitermes trinervoides [uncultured bacterium] |
| 7AYP_A | 2.42e-89 | 35 | 247 | 1 | 206 | Structureof a GH11 domain refined from the X-ray diffraction data of a GH11-CBM36-1 crystal. [uncultured bacterium] |
| 2F6B_A | 2.97e-81 | 36 | 242 | 1 | 201 | Structuraland active site modification studies implicate Glu, Trp and Arg in the activity of xylanase from alkalophilic Bacillus sp. (NCL 87-6-10). [Bacillus],2F6B_B Structural and active site modification studies implicate Glu, Trp and Arg in the activity of xylanase from alkalophilic Bacillus sp. (NCL 87-6-10). [Bacillus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P29126 | 1.97e-174 | 35 | 781 | 27 | 954 | Bifunctional endo-1,4-beta-xylanase XylA OS=Ruminococcus flavefaciens OX=1265 GN=xynA PE=3 SV=1 |
| P51584 | 2.60e-94 | 272 | 779 | 38 | 538 | Endo-1,4-beta-xylanase Y OS=Acetivibrio thermocellus OX=1515 GN=xynY PE=1 SV=1 |
| Q53317 | 1.74e-91 | 40 | 417 | 34 | 406 | Xylanase/beta-glucanase OS=Ruminococcus flavefaciens OX=1265 GN=xynD PE=3 SV=2 |
| Q8GJ44 | 8.02e-87 | 1 | 373 | 1 | 349 | Endo-1,4-beta-xylanase A OS=Thermoclostridium stercorarium OX=1510 GN=xynA PE=1 SV=2 |
| P33558 | 1.23e-83 | 1 | 373 | 1 | 350 | Endo-1,4-beta-xylanase A OS=Thermoclostridium stercorarium OX=1510 GN=xynA PE=1 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000270 | 0.999044 | 0.000217 | 0.000162 | 0.000140 | 0.000129 |