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CAZyme Information: MGYG000001925_01904

You are here: Home > Sequence: MGYG000001925_01904

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp900544675
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp900544675
CAZyme ID MGYG000001925_01904
CAZy Family PL10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
729 MGYG000001925_25|CGC1 82965.42 6.2181
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001925 3441241 MAG Denmark Europe
Gene Location Start: 35928;  End: 38117  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001925_01904.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL10 58 345 5.2e-98 0.9930555555555556
CE19 396 724 1.1e-28 0.858433734939759

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
TIGR02474 pec_lyase 4.75e-98 58 347 1 290
pectate lyase, PelA/Pel-15E family. Members of this family are isozymes of pectate lyase (EC 4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase. [Energy metabolism, Biosynthesis and degradation of polysaccharides]
pfam09492 Pec_lyase 2.29e-97 58 347 1 289
Pectic acid lyase. Members of this family are isozymes of pectate lyase (EC:4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase.
COG0412 DLH 1.63e-20 442 722 4 235
Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism].
pfam12715 Abhydrolase_7 2.99e-14 395 679 45 326
Abhydrolase family. This is a family of probable bacterial abhydrolases.
COG1506 DAP2 1.55e-08 429 672 358 568
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADY37157.1 0.0 1 727 8 734
QDU41600.1 1.56e-115 20 353 51 386
QDT46035.1 6.16e-115 20 353 51 386
QDU80650.1 2.01e-103 20 359 48 389
AFN74742.1 1.69e-95 13 356 24 381

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1R76_A 1.33e-50 9 357 48 408
ChainA, pectate lyase [Niveispirillum irakense]
1GXM_A 3.06e-40 51 338 37 314
Family10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXM_B Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXN_A Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus]
1GXO_A 3.73e-39 51 338 37 314
MutantD189A of Family 10 polysaccharide lyase from Cellvibrio cellulosa in complex with trigalaturonic acid [Cellvibrio japonicus]
3G8Y_A 2.72e-11 369 713 20 352
ChainA, SusD/RagB-associated esterase-like protein [Phocaeicola vulgatus ATCC 8482]
1L7A_A 6.86e-06 432 722 52 317
structuralGenomics, crystal structure of Cephalosporin C deacetylase [Bacillus subtilis],1L7A_B structural Genomics, crystal structure of Cephalosporin C deacetylase [Bacillus subtilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O34973 3.71e-30 401 719 2 297
Putative hydrolase YtaP OS=Bacillus subtilis (strain 168) OX=224308 GN=ytaP PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.005126 0.993800 0.000255 0.000347 0.000234 0.000213

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001925_01904.