CAZyme Information: MGYG000001925_01103

Basic Information

• Species: Phocaeicola sp900544675
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp900544675
• CAZyme ID: MGYG000001925_01103
• CAZy Family: PL15
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
851	MGYG000001925_11|CGC3	96475.41	4.7008

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001925	3441241	MAG	Denmark	Europe

• Gene Location: Start: 60016; End: 62571 Strand: +

Full Sequence      

MKRPYPLFRFGLPICVAIACGLAFQACSDDAVEPEPSVPQPEVTYPDAYQDKVRTQPYPK
LSNELIVNPAPFLVPESMKTGEKLQYALSRTEDFADAEISTPQDGCMYNLHRALESGTWY
WRFRSTDATGGNPGEWSDTYPFEVKAETPVFVTPPFEDFLENAPRVHPRLYCFLNPYIAE
AKQHVTSHPEYRQLTARASLAMDADYATMDLYANADVLRQYATWLYHAYYLLEDERYADK
LIELLDAMAAMPPTDEQFFTDNFDTSAIMLANAAGYDLLYDRLTATQRAAAEEIMMRGLT
HFYGEQCGSEENQLFDNHFWQQNMRIATQTAFVLYDKSAYADEVLPMLRYYYELWTARAP
ASGFNRDGIWHNGTGYFPANVKTLAYMPALFSYIARCDFLQHPWYRNAGRALAYTNPPDS
KSPGFGDQSERYDEPNRLVAAFADYLARETGDAYAGWYAGACQSLVRQDYELRLYRMCSN
RTYESALPETAAKMVWYTDAGEVSMHSHLGDTEHDLALEFRSSTFGSGSHTTASQNAFNL
LYKGKDVYRSTGYYQAFADAHNLMSYRHTRAHNTILVNGIGQPYSTKGYGSIVRALGGNH
ISYALGDASHAYCGISDDPMWVNYFALAGITQTPDNGFGETPLIRYRRHILMLHPHTVLI
YDELEASEAVRWDWLLHSPTRFNIETEDRLLSTADTEGDFFATTQLFGNESMTLSQTDQF
VVPPATSGAEYPNQWHLTACTDNQSATRYLAIIQVCDAGDSPYIIRREGNTFTWGNWTVE
AELDASAHPRLTVHHQTEPVVFSYGEETPKINGMPYSRQAPDSSLLYDETNGEYQVMEMT
DRAPIATRRGF

Enzyme Prediction     

No EC number prediction in MGYG000001925_01103.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL15	508	664	7.2e-50	0.9850746268656716

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16332	DUF4962	2.98e-77	52	459	6	445	Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940	Hepar_II_III	1.58e-06	526	701	35	188	Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QIU94214.1	0.0	10	848	5	846
QDM11441.1	0.0	24	848	18	844
QUT78344.1	0.0	24	848	18	844
CBK68010.1	0.0	24	848	5	831
QUT32653.1	0.0	24	848	18	844

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6LJA_A	1.14e-100	14	796	11	827	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
6LJL_A	5.97e-98	14	796	11	827	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
3A0O_A	2.32e-25	268	678	259	661	Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000002	0.000503	0.999511	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001925_01103.