logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001835_01358

You are here: Home > Sequence: MGYG000001835_01358

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp000432735
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp000432735
CAZyme ID MGYG000001835_01358
CAZy Family PL10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
732 MGYG000001835_14|CGC1 83931.77 6.4131
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001835 3299974 MAG Denmark Europe
Gene Location Start: 43584;  End: 45782  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001835_01358.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL10 64 352 1.1e-97 0.9965277777777778
CE19 401 731 1.3e-28 0.8644578313253012

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam09492 Pec_lyase 4.13e-95 64 353 1 289
Pectic acid lyase. Members of this family are isozymes of pectate lyase (EC:4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase.
TIGR02474 pec_lyase 4.76e-95 64 352 1 289
pectate lyase, PelA/Pel-15E family. Members of this family are isozymes of pectate lyase (EC 4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase. [Energy metabolism, Biosynthesis and degradation of polysaccharides]
COG0412 DLH 9.68e-21 441 682 1 179
Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism].
pfam12715 Abhydrolase_7 1.25e-16 401 685 45 326
Abhydrolase family. This is a family of probable bacterial abhydrolases.
COG1506 DAP2 2.76e-10 435 678 358 568
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADY37157.1 0.0 2 729 3 730
QDU41600.1 1.33e-114 29 363 54 390
QDT46035.1 8.12e-113 29 359 54 386
QDU80650.1 3.28e-106 29 365 51 389
BAV08751.1 2.56e-90 11 363 20 382

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1R76_A 1.64e-48 48 362 78 407
ChainA, pectate lyase [Niveispirillum irakense]
1GXM_A 4.78e-36 57 344 37 314
Family10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXM_B Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXN_A Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus]
1GXO_A 5.63e-35 57 344 37 314
MutantD189A of Family 10 polysaccharide lyase from Cellvibrio cellulosa in complex with trigalaturonic acid [Cellvibrio japonicus]
3G8Y_A 2.14e-15 382 719 27 352
ChainA, SusD/RagB-associated esterase-like protein [Phocaeicola vulgatus ATCC 8482]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O34973 1.49e-30 407 725 2 297
Putative hydrolase YtaP OS=Bacillus subtilis (strain 168) OX=224308 GN=ytaP PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000335 0.998942 0.000199 0.000178 0.000159 0.000151

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001835_01358.