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CAZyme Information: MGYG000001789_01468

You are here: Home > Sequence: MGYG000001789_01468

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp002161565
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp002161565
CAZyme ID MGYG000001789_01468
CAZy Family CE12
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
574 MGYG000001789_19|CGC2 64752.87 6.771
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001789 3544186 MAG Denmark Europe
Gene Location Start: 33554;  End: 35278  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001789_01468.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 271 546 7e-104 0.9618055555555556
CE12 26 255 1.7e-78 0.9952380952380953

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd01821 Rhamnogalacturan_acetylesterase_like 1.26e-87 25 255 1 198
Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
PLN02773 PLN02773 3.96e-83 273 543 9 284
pectinesterase
PLN02682 PLN02682 9.87e-75 269 543 69 349
pectinesterase family protein
pfam01095 Pectinesterase 2.19e-74 270 535 1 272
Pectinesterase.
PLN02432 PLN02432 2.38e-65 273 543 15 274
putative pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADY37158.1 0.0 1 574 1 574
QEW38148.1 0.0 3 574 2 575
AII65135.1 0.0 3 574 2 575
AII67884.1 0.0 3 574 2 575
QJR56762.1 0.0 3 574 2 575

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1XG2_A 1.04e-42 272 571 6 313
ChainA, Pectinesterase 1 [Solanum lycopersicum]
1GQ8_A 1.09e-42 272 555 10 304
Pectinmethylesterase from Carrot [Daucus carota]
2NSP_A 2.82e-37 269 561 4 339
ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]
2NTB_A 7.12e-33 269 561 4 339
Crystalstructure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTB_B Crystal structure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTP_A Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTP_B Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTQ_A Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937],2NTQ_B Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937]
1QJV_A 7.12e-33 269 561 4 339
ChainA, PECTIN METHYLESTERASE [Dickeya chrysanthemi],1QJV_B Chain B, PECTIN METHYLESTERASE [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9LVQ0 3.06e-60 273 543 9 284
Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1
Q8VYZ3 1.62e-51 275 543 90 363
Probable pectinesterase 53 OS=Arabidopsis thaliana OX=3702 GN=PME53 PE=2 SV=1
Q9FM79 5.66e-50 272 542 83 359
Pectinesterase QRT1 OS=Arabidopsis thaliana OX=3702 GN=QRT1 PE=1 SV=1
P41510 4.65e-49 272 538 274 549
Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus OX=3708 GN=BP19 PE=2 SV=1
Q42608 1.37e-48 272 538 261 536
Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris OX=3711 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.025175 0.222835 0.751654 0.000101 0.000106 0.000118

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001789_01468.