CAZyme Information: MGYG000001780_04199

Basic Information

• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
• CAZyme ID: MGYG000001780_04199
• CAZy Family: GH106
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
937	MGYG000001780_46|CGC1	105428.62	6.1692

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001780	6261722	MAG	Denmark	Europe

• Gene Location: Start: 18411; End: 21224 Strand: +

Full Sequence      

MKNEEFVMKKNLLVILFASFCAGTLSAQSVSWPEVTTDAKPAARWWWMGSAVDAANLTHN
LEAYSEAGMGTMEITPIYGVQGNDANDIQFLSPQWMQMLRHTESEAARLGMKIDMNTGTG
WPFGGPEVSIKDAACKLLIEEYTLKGGERLKTKIEVVDEKQRPHAKLSRLMAFRVLPDSS
TPKEQKARPCFNLTSKVKDGKLNWKAPKGEWRLIAVFTGKTLQKVKRAAPGGEGYVMNHF
SARAVSNYLGRFERAFTETPTDYPHNFFNDSYEVYGADWTEDLFEQFALRRGYRLEDFLP
EFLSQERTETTRRIISDYRETLGELLQENFTRQWTDWAHKHGSRTRNQAHGSPGNLIDLY
ATVDVPECEGFGLSDFGIRGLRKDSLTRPNDSDLSMLKYASSAAHIAGKPFTTSETFTWL
TEHFRTSLSQCKPDIDLMFISGVNHTYFHGTTYSPVEAAWPGWKFYASIDMSPTNNIWRD
APAFFDYITRCQSFLQMGQPDNDFLVYLPVYDMWDEQDGRLLLFDIHKMAQRAPRFIEAV
HRIYGAGYDMDYISDNFIRNAMCQDGKILTSGGVSYKALVVPGARLMPADVLEKLLRLAD
EGAVIVFLEQYPEDVPGLNSLSGRRAEFNKVLAQIKEREGKGNVIFGTDYARTLAATAAV
PEDMKTTFGLSSIRRSHPEGHHYFISALKAEDTEGWVPLAVQARSAMLYNPMNGTSGKAR
LRQDNGKTEVFLQLASGESVILKTFDNQDVTVPEYGYWTPMLGENEVKNLLSDKQWGFRF
VESTPAVGITPDSVSLGSWTELAAEGVKNAMGAACYTTTFTVKNPAEVAEWMLDLGDVRE
SARVRINGQEVATLFAVPYRCLIGKYLRAGANMLEVEVTNLPANRIADMDRNNVPWRIYK
DANIVNIHYKKDNYGKWDPVPSGLLGPVSLVPMEALK

Enzyme Prediction     

EC	3.2.1.174

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH106	31	932	3e-287	0.9939320388349514

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17132	Glyco_hydro_106	6.28e-67	193	716	356	866	alpha-L-rhamnosidase.
cd03143	A4_beta-galactosidase_middle_domain	0.010	575	650	53	136	A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUT89606.1	0.0	8	937	1	942
ALJ59333.1	0.0	8	937	1	942
QDO67792.1	0.0	8	937	1	942
QUT73830.1	0.0	1	937	1	920
QIK53005.1	0.0	9	937	3	925

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5MQM_A	3.58e-46	38	929	41	1097	Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron],5MQN_A Glycoside hydrolase BT_0986 [Bacteroides thetaiotaomicron]
5MWK_A	8.32e-46	38	929	41	1097	Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron]
6Q2F_A	4.60e-40	191	931	413	1139	Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
T2KNA8	2.83e-53	33	742	25	736	Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22040 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.001273	0.732847	0.264486	0.000863	0.000289	0.000225

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001780_04199.