CAZyme Information: MGYG000001780_00965

Basic Information

• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
• CAZyme ID: MGYG000001780_00965
• CAZy Family: GH55
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
992		111216.45	6.634

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001780	6261722	MAG	Denmark	Europe

• Gene Location: Start: 118978; End: 121956 Strand: -

Full Sequence      

MNRIRIHFFFLIVILAGGIQAQNPRSVFTDRPVDTTAVYFTPEYFSIKADGNADVSDALQ
EAVNAAKHKESGCGILFVPEGVYKLSKTIYVPAGVRLIGYGAKRPVFVLTRNAPGFREKT
SETNKGKYLFWFISGNYRPGRPVTDANAGTFYSSLMNADIRIEDGNPNASAIRAHFAQHC
SISNVTIHVGKGRAGIVDAGNHLENVSVFGGEYGIDTDKSAPGWPIMLLNTYFEGQRKSA
ILTNEGGLTIVRMKVKDVPVAVEIKEDAPDRLFMEDCIFENVRRTGVILTDAGNAATQIN
LRNIQCKNVPVFSLERSNNEQVSGKGKTYRITRFTFGFNADSLEDTPQIVREAETETIKN
IIPLDASDTPMLPATDQWVNIRDLGAKGDGFSDDTQIFREAVEKYTNIYLPQGWYVVKEP
LVLKQNTNLIGLHPGTTIMLTLGGNPAFSGFGAPQAQLTTPEKGTNIVCGIFLNADAYNY
RAVNCKWMAGEGSYLYDVKFSGHDKNRFFHNGQSAANPLEKPMPITPETHDLILRAWDNQ
HWSLWITNGGGGTFRDLWTANEYSSAGLYVSHTETPGRIYGMSLEHHLRNEAIFRNVANW
KIYDFQFEVEAEGIDTQPLDLIDCRNMTFANFYSYRVSRMLKSYPSAIRTWNCKDIEFLN
LHNYAHARVKFTSNASLYDVNTRHEARRWEFARLKLTGEENRKYPLSNEKGKAEVIVSGF
EFIDGLAKDSRGNIYFCESRMRRIYKLDAVNGQVTSIADFPWNAVALVCDTEDNLIVVTK
YISQPGYNNDDTRNDRQPLFGWRGSGGLWGFTYVPRLYSIRPDNADESFRVLPLVSMEQI
QAPKKVCYLANRTITQNEYYGGRKPAQCFVAPDGVTIIPYYEDLFRCSSIIEAAPGEAIY
TLDEYHQRVIRSEVDNRGFLQNSHLFADGGDRSVVTDQAGNVYVTNGDVSIFDSTGKPIG
TIEVPERPTSLLIAGDRLYITAVSSLYQVRIQ

Enzyme Prediction     

No EC number prediction in MGYG000001780_00965.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH55	129	468	1.2e-57	0.4689189189189189

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam12708	Pectate_lyase_3	1.38e-12	45	217	7	171	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
pfam12708	Pectate_lyase_3	2.81e-09	378	500	1	134	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
COG5434	Pgu1	1.22e-06	374	429	78	137	Polygalacturonase [Carbohydrate transport and metabolism].
COG3386	YvrE	5.60e-06	731	982	36	274	Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism].
cd14962	NHL_like_6	0.002	933	981	61	117	Uncharacterized NHL-repeat domain in bacterial proteins. The NHL (NCL-1, HT2A and LIN-41) repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QDO68111.1	0.0	1	992	1	992
QUT65855.1	0.0	1	991	1	991
QUU01291.1	0.0	1	991	1	991
QMI79027.1	0.0	1	992	1	1004
QUU00135.1	1.49e-315	11	992	12	1005

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3EQN_A	1.16e-15	38	599	48	630	ChainA, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQN_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_A Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.001029	0.954188	0.043958	0.000299	0.000261	0.000235

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001780_00965.