CAZyme Information: MGYG000001748_00737

Basic Information

• Species: CAG-56 sp900762665
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; CAG-56; CAG-56 sp900762665
• CAZyme ID: MGYG000001748_00737
• CAZy Family: CBM67
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1949	MGYG000001748_6|CGC2	214219.57	4.8776

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001748	4218051	MAG	Sweden	Europe

• Gene Location: Start: 65650; End: 71499 Strand: -

Full Sequence      

MKKKLWNKRGLALLTAAALALSSFQPVLAAGNAVNVEARAESTVITDLKTNDLRNPVGID
TVNPSFSWKMESNVLGQYQKAYQIEVARDSEFTDMVWDSGKKEDGNSVGITYAGEEALEP
SSAYFWRVKVTDKEGKAIVSETARFELGLNGNEGWNQSQWIQVGTSTKPPAPVGKEIHYV
IEADIEIVNNSVSPLIEAKDKQNYLLWQFNNNRASKRWVFKPHRVTNGPNYTTLREIDVN
DWVRTDTAVQHMKVEVTGSEITTYLNDHEIVAIPVSEVGGVGANGEIGLLGFRSHEIDQE
KGFMDNITITDYSSDPNGVIVKNYTFEDGENPFDLGTVENGRLNTSFISGETIALEKTAE
DNLTPVHYQVTAEVTCETEAISLLFNGVDTSNFYMFQLNTKDTPGKVLFKPHTWNDGNIS
TYTEHTKDVTGAVGSVEELKTTPVSVLIDVTEKEIKTYLNEQLIDTFPISDSRGIAPIAG
SLGLRAEANENGTVDNFKLTDYTDDAENGKVIYNYDFEGENPFTKGTIKDGKFVASQLGI
LFPPQASGVPTFRKSVTPKAELVSAKLYTAGLGVYDAFINGERVGTRLDDGSMKYDELKP
GYTHFQKRTIYHTYDVTQMLEAGKENILSAHVTSGWWTGRVAGPGGKKEAFRAQLLLNYA
DGTSEVIGTDNSWKTSLQGPLLMADIYDGETYDATADVSFRKTGYDDSEWTYAEQNTEFS
GEICSQVGPSIQVREDLELTAKSAVVYDGAEGADDTKYGKIHETGRYASGESFVLKAGET
AVFDMGQNFAGWDEITVEGQKGTKLTMRHGEMLNDREGLKSRGNDGPEGSIYTENLRSAQ
ATGRYIMSGEGRETYHATATFYGFQYVEVTTTEDVTIHGMKGIVVTSVAEDTGSVSTSDE
DVNQLISNIFWGQYSNYLSTATDCPQRDERRGWTADAQVFSTAACYNADSKGFLRKYMAD
MRDSQIDDPNDRYYGAYPDTAPYNIYKPYGEIGQLGWGDAGIIIPYNLYKMYGDSAVIEE
NYDCMQKFMDYFMESTDKWGGEHNHGDHLAYEDNGDDVKNAFGIAYYAWDAQMMAEMAAV
LGKTEDVEKYQKVYEEEKAFFQENFVQKDGSLRRTEQTVCLMALKMDLLPDENSRQLAKQ
ALLDNIKRNGNKLQTGFLGTAIIMQTLSDIGAADVAYQLLLQHGNPSWLYSVDQGATTIW
ERWNSYTLEGGFGPVSMNSFNHYAYGAVAEWMYGYMAGIMYDTENPGFRRIVLQPSPDQS
LEKVDCSYESAYGTIESNWKYEKGMFCYNATVPANTTAAIYVPVEENRSLTVNGKAPDKV
TKETDGITYVKTENGKAVFEAGSGSYEFSTAVSKYYSLKLEKSDDAVSGDVSINGGSAQS
LPCEIRIKEGDTVAIQALPPKNDVDYTFAGWSGDAISDDFEVKVTAEKDIALTANYKKST
RKNLALNKPVSSNNGMEIENWRLVNLVDGILTSAPGSLGFTTNPYKSPDISEPCWIEIDL
GEDMAFDRVQLYPRSDTQSSSQMAANFPRDFTLEVRGSGEADYRIIGTYKDQNVTAEKPA
VYEFDTVYARYVRINVSKLGDLAAADPLSYYVQLAEMGVYAPVPIIEKVVVAPAAAEVKQ
GETQQFTAEVSGQYDPDQDVRWTVEGNTSEKTAISAEGLLTVGTDETAKTMTVRAVSAQD
HTKEGTAEVTVIEKEIPTPPQTVKVSQITVKADDSRIFTGEKTSVKATVLPVNAENKKVT
WTSSDSSIAMVDGNGAVSAKKAGTVTVTATAADGSSVSGKCTIQVVKPTVKLNASSAKLQ
RGTSTKALKVSGLQKGDKIKSWSSSNTRVATVNRSGKITAKKIGTVKITVTTVKGAKATC
KLKVIKGKVKTTKITVKKTKISLKKGQRYSLEVQRVPVTATERITYKTSDKKVAAVSKKG
IITARKKGKARIVIRTSNGKTKRVTVTVK

Enzyme Prediction     

EC	3.2.1.40

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	778	1301	1.3e-156	0.9841269841269841
CBM67	545	716	3.2e-27	0.8863636363636364

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17389	Bac_rhamnosid6H	3.41e-118	890	1236	1	340	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam08531	Bac_rhamnosid_N	1.86e-48	560	735	1	172	Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.
pfam05592	Bac_rhamnosid	1.25e-29	780	876	7	97	Bacterial alpha-L-rhamnosidase concanavalin-like domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
COG5492	YjdB	1.10e-17	1680	1860	161	329	Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
pfam17390	Bac_rhamnosid_C	5.82e-17	1246	1316	7	77	Bacterial alpha-L-rhamnosidase C-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BCA51920.1	1.74e-249	42	1348	18	1145
QUT40529.1	3.41e-249	42	1348	18	1145
QQA09206.1	3.61e-248	42	1348	18	1145
ADD61991.1	5.06e-248	42	1348	18	1145
QUT72731.1	9.92e-248	42	1348	18	1145

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3W5M_A	9.00e-135	558	1349	312	1029	CrystalStructure of Streptomyces avermitilis alpha-L-rhamnosidase [Streptomyces avermitilis MA-4680 = NBRC 14893],3W5N_A Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase complexed with L-rhamnose [Streptomyces avermitilis MA-4680 = NBRC 14893]
6I60_A	7.42e-101	550	1348	177	939	Structureof alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12],6I60_B Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12]
6GSZ_A	1.07e-99	552	1303	134	847	Crystalstructure of native alfa-L-rhamnosidase from Aspergillus terreus [Aspergillus terreus]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q82PP4	3.64e-134	558	1349	312	1029	Alpha-L-rhamnosidase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=SAVERM_828 PE=1 SV=1
T2KNB2	1.50e-129	529	1353	159	925	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22090 PE=1 SV=2
P9WF03	1.36e-100	553	1315	174	891	Alpha-L-rhamnosidase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_34 PE=1 SV=1
T2KPL4	4.42e-64	552	1347	187	946	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22170 PE=2 SV=1
P33747	3.68e-13	1703	1864	35	201	Uncharacterized protein CA_P0160 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=CA_P0160 PE=3 SV=2

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000417	0.998660	0.000295	0.000242	0.000196	0.000164

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001748_00737.