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CAZyme Information: MGYG000001738_02026

You are here: Home > Sequence: MGYG000001738_02026

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Duncaniella sp001701225
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; Duncaniella; Duncaniella sp001701225
CAZyme ID MGYG000001738_02026
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
585 MGYG000001738_25|CGC1 63487.99 5.1573
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001738 3129928 MAG Sweden Europe
Gene Location Start: 17512;  End: 19269  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001738_02026.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 75 274 3e-71 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 1.65e-06 4 224 8 239
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 1.63e-05 73 224 1 154
Amb_all domain.
pfam00544 Pec_lyase_C 0.010 81 224 27 179
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCD40778.1 1.55e-293 10 585 6 598
QCP73827.1 1.55e-293 10 585 6 598
QNT67774.1 8.70e-230 24 585 5 586
AGB28243.1 8.97e-206 24 529 23 525
VEH16322.1 3.66e-204 24 574 28 567

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6FI2_A 7.54e-08 30 228 46 254
VexL:A periplasmic depolymerase provides new insight into ABC transporter-dependent secretion of bacterial capsular polysaccharides [Achromobacter denitrificans]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q5B297 1.03e-42 25 509 22 411
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
A1DPF0 1.39e-42 10 509 8 415
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
B0XMA2 3.63e-42 10 509 8 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 3.63e-42 10 509 8 415
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
B8NQQ7 4.91e-42 25 509 22 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000265 0.999095 0.000167 0.000155 0.000156 0.000143

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001738_02026.