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CAZyme Information: MGYG000001693_01612
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Halorubrum lipolyticum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Archaea; Halobacteriota; Halobacteria; Halobacteriales; Haloferacaceae; Halorubrum; Halorubrum lipolyticum | |||||||||||
| CAZyme ID | MGYG000001693_01612 | |||||||||||
| CAZy Family | AA3 | |||||||||||
| CAZyme Description | Oxygen-dependent choline dehydrogenase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 99086; End: 100693 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA3 | 16 | 533 | 5e-56 | 0.5032362459546925 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG2303 | BetA | 1.94e-86 | 16 | 534 | 6 | 536 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
| pfam05199 | GMC_oxred_C | 5.57e-25 | 405 | 526 | 1 | 142 | GMC oxidoreductase. This domain found associated with pfam00732. |
| pfam00732 | GMC_oxred_N | 8.21e-20 | 99 | 319 | 25 | 217 | GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
| PRK02106 | PRK02106 | 1.46e-11 | 22 | 534 | 10 | 534 | choline dehydrogenase; Validated |
| TIGR02462 | pyranose_ox | 1.33e-10 | 405 | 535 | 415 | 546 | pyranose oxidase. Pyranose oxidase (also called glucose 2-oxidase) converts D-glucose and molecular oxygen to 2-dehydro-D-glucose and hydrogen peroxide. Peroxide production is believed to be important to the wood rot fungi in which this enzyme is found for lignin degradation. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QWC19282.1 | 0.0 | 2 | 535 | 13 | 547 |
| QWC20507.1 | 8.20e-13 | 22 | 534 | 10 | 527 |
| QMW36122.1 | 1.29e-10 | 9 | 533 | 6 | 531 |
| QRD92907.1 | 1.29e-10 | 9 | 533 | 6 | 531 |
| QMW48182.1 | 1.29e-10 | 9 | 533 | 6 | 531 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6A2U_B | 1.20e-91 | 18 | 535 | 9 | 539 | Crystalstructure of gamma-alpha subunit complex from Burkholderia cepacia FAD glucose dehydrogenase [Burkholderia cepacia],6A2U_D Crystal structure of gamma-alpha subunit complex from Burkholderia cepacia FAD glucose dehydrogenase [Burkholderia cepacia] |
| 3LJP_A | 1.72e-14 | 22 | 532 | 18 | 527 | ChainA, Choline oxidase [Arthrobacter globiformis],3LJP_B Chain B, Choline oxidase [Arthrobacter globiformis] |
| 3T37_A | 2.18e-14 | 10 | 509 | 12 | 498 | Crystalstructure of pyridoxine 4-oxidase from Mesorbium loti [Mesorhizobium loti] |
| 4HA6_A | 3.67e-14 | 17 | 509 | 1 | 482 | Crystalstructure of pyridoxine 4-oxidase - pyridoxamine complex [Mesorhizobium loti] |
| 2JBV_A | 5.32e-14 | 22 | 532 | 18 | 527 | Crystalstructure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],2JBV_B Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],4MJW_A Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis],4MJW_B Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| M1VMF7 | 1.56e-83 | 17 | 531 | 7 | 537 | Fructose dehydrogenase large subunit OS=Gluconobacter japonicus OX=376620 GN=fdhL PE=1 SV=1 |
| Q3YAT3 | 1.07e-54 | 19 | 534 | 9 | 533 | 2-methyl-1,2-propanediol dehydrogenase OS=Mycolicibacterium austroafricanum OX=39687 GN=mpdB PE=1 SV=1 |
| Q53U15 | 1.25e-40 | 19 | 531 | 39 | 529 | Paromamine 6'-oxidase OS=Streptomyces fradiae OX=1906 GN=neoG PE=1 SV=1 |
| Q2MF66 | 1.34e-40 | 19 | 535 | 39 | 538 | 6'''-hydroxyparomomycin C oxidase OS=Streptomyces lividus OX=282216 GN=livQ PE=1 SV=1 |
| O34214 | 1.75e-31 | 22 | 534 | 33 | 604 | Gluconate 2-dehydrogenase flavoprotein OS=Pantoea cypripedii OX=55209 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000024 | 0.000028 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |