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CAZyme Information: MGYG000001689_00970

You are here: Home > Sequence: MGYG000001689_00970

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Blautia coccoides
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Blautia; Blautia coccoides
CAZyme ID MGYG000001689_00970
CAZy Family GH136
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1441 MGYG000001689_3|CGC1 157746.98 3.9878
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001689 6086770 Isolate United States North America
Gene Location Start: 25131;  End: 29456  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001689_00970.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH136 33 547 1.2e-109 0.9918533604887984
CBM32 905 1031 6.3e-16 0.9032258064516129

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00754 F5_F8_type_C 4.13e-13 696 818 4 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam00754 F5_F8_type_C 3.19e-12 905 1031 5 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
TIGR02168 SMC_prok_B 2.29e-06 1036 1323 698 984
chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
COG1196 Smc 3.52e-06 1065 1326 715 1006
Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning].
COG1196 Smc 9.15e-06 1039 1324 228 494
Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QMW76217.1 0.0 1 1441 1 1441
QIB55915.1 0.0 1 1441 1 1441
QRO38181.1 0.0 1 1325 1 1339
QBF74993.1 0.0 1 1325 1 1339
BCA49028.1 5.10e-76 14 547 22 520

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7V6M_A 6.40e-53 32 552 7 579
ChainA, Fibronectin type III domain-containing protein [Tyzzerella nexilis]
7V6I_A 1.79e-32 31 554 11 613
ChainA, Lacto-N-biosidase [Bifidobacterium saguini DSM 23967]
6KQT_A 6.30e-27 33 421 244 638
CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - native protein [Eubacterium ramulus ATCC 29099]
6KQS_A 4.47e-26 33 421 244 638
CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - selenomethionine derivative [Eubacterium ramulus ATCC 29099]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
E8MGH9 2.72e-10 923 1330 1528 1884
Beta-L-arabinobiosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001194 0.814182 0.183445 0.000562 0.000343 0.000257

TMHMM  Annotations      download full data without filtering help

start end
1415 1432