CAZyme Information: MGYG000001657_00957

Basic Information

• Species: RC9 sp900760425
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA932; RC9; RC9 sp900760425
• CAZyme ID: MGYG000001657_00957
• CAZy Family: PL29
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
849	MGYG000001657_42|CGC1	93964.72	4.9078

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001657	2980281	MAG	United States	North America

• Gene Location: Start: 7962; End: 10511 Strand: -

Full Sequence      

MKAKSAILLSAILYAGVCCTDRNEIEEHPGTAGPETEQLETDLKITNDNTTVAYQKLAEG
LIIVGKTEVKAPDGTVTGYFLEFSDGTSYNVRFGDRFMTSAPVIGEDSEGYWAFSFDRGD
SWTRIEGNTKVSRRPALLGLDKEYFWTISTGAKYKQLMDGSGRPVKASECTPVKGNSIFS
GISCDDRKMTFSLVTGRTLENIVDDSFSLSIDIEDKPSIKLGETRKIPVKKQSVASFEIQ
CPENWHASLYDDGQGSWLDVTAPQDASEGTYDIVITYMSDKGYVRKSVLRFTLLMISIDF
DGCEEWDGFLEEKGKGLLLDYSYAGYNHGETAPADVWSLGYKVYDVTDFGAVPDDGKSDR
DAFLKALEKALGTPDRSNSSRIAFPSKPSANAIIYFPEGEFILHTAEDDVTEDGKQVSQG
IVIRAGNFIIKGAGRDRTTIVMQDPNQPVNPKVMYSSPDMLLITHWTAFSSQNNWDVTED
AARGSFSVELAGHELKAGDWVCLHILSKDTGFLKEELYPHYTEAMNYSGGSWSILKNGAE
VNDFHQVRSVSGNTVTFHEPIMHEIKAQYGWKVYRYPNYSNVGIEDITFRGNAKEHFVHH
GSWEDDGAYKPISMTRLTDSWLRRCGFESTSEACSVSSCANVSVYDITFSGRRGHSSIRS
AGSSRVFIGATVDRTSGDLIGSRQFCENAGNYHAVGVSKPSMGAVLWRNTWGDDSCFESH
ATQPRATLIDCCRGGFMRYRMGGDADELPNHLSDLTLWNFEMTSANKGGQSGNDYSNWLW
WGQQGSAYWTTLPPIIVGFHGVTPVSFTEEKGDTRHIGSNGTPVQPESLYEAQLQARLGY
VPAWLNALK

Enzyme Prediction     

No EC number prediction in MGYG000001657_00957.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL29	343	673	2.7e-100	0.9966777408637874

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16315	DUF4955	4.24e-72	690	848	1	149	Domain of unknown function (DUF4955). This family consists of uncharacterized proteins around 850 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam16378	DUF4988	7.66e-19	37	200	13	179	Domain of unknown function. This family around 200 residues locates in the N-terminal of some uncharacterized proteins in various Bacteroides and Alistipes species. The function of this family remains unknown. The N-terminus of this model has been clipped by ~30 residues as it was capturing parts of collagen sequences, pfam01391.
pfam12708	Pectate_lyase_3	7.68e-05	345	474	3	97	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QDM10828.1	9.48e-217	9	849	6	833
QUT78855.1	9.48e-217	9	849	6	833
QNL40303.1	1.34e-216	9	849	14	833
CBK63379.1	8.45e-213	19	849	19	858
QRQ54963.1	4.16e-193	35	849	26	862

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.001185	0.219140	0.779187	0.000145	0.000182	0.000150

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001657_00957.