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CAZyme Information: MGYG000001591_01010

You are here: Home > Sequence: MGYG000001591_01010

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parabacteroides timonensis
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides timonensis
CAZyme ID MGYG000001591_01010
CAZy Family GH141
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
833 MGYG000001591_11|CGC2 94128.05 4.9592
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001591 5999279 MAG China Asia
Gene Location Start: 51867;  End: 54368  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001591_01010.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH141 25 540 2.3e-67 0.9905123339658444

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd04084 CBM6_xylanase-like 5.21e-14 720 827 3 123
Carbohydrate Binding Module 6 (CBM6); many are appended to glycoside hydrolase (GH) family 11 and GH43 xylanase domains. This family includes carbohydrate binding module 6 (CBM6) domains that are appended mainly to glycoside hydrolase (GH) family domains, including GH3, GH11, and GH43 domains. These CBM6s are non-catalytic carbohydrate binding domains that facilitate the strong binding of the GH catalytic modules with their dedicated, insoluble substrates. Examples of proteins having CMB6s belonging to this family are Microbispora bispora GghA, a 1,4-beta-D-glucan glucohydrolase (GH3); Clostridium thermocellum xylanase U (GH11), and Penicillium purpurogenum ABF3, a bifunctional alpha-L-arabinofuranosidase/xylobiohydrolase (GH43). GH3 comprises enzymes with activities including beta-glucosidase (hydrolyzes beta-galactosidase) and beta-xylosidase (hydrolyzes 1,4-beta-D-xylosidase). GH11 family comprises enzymes with xylanase (endo-1,4-beta-xylanase) activity which catalyze the hydrolysis of beta-1,4 bonds of xylan, the major component of hemicelluloses, to generate xylooligosaccharides and xylose. GH43 includes beta-xylosidases and beta-xylanases, using aryl-glycosides as substrates. CBM6 is an unusual CBM as it represents a chimera of two distinct binding sites with different modes of binding: binding site I within the loop regions and binding site II on the concave face of the beta-sandwich fold.
pfam13229 Beta_helix 6.73e-09 324 471 3 156
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
smart00606 CBD_IV 3.72e-07 714 827 2 129
Cellulose Binding Domain Type IV.
pfam03422 CBM_6 1.87e-05 721 827 1 123
Carbohydrate binding module (family 6).
pfam13229 Beta_helix 0.003 275 376 49 147
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGQ93900.1 9.54e-104 25 701 2 686
QNK55672.1 6.35e-102 26 706 5 693
QJD86952.1 6.78e-100 26 708 7 703
QUH29313.1 5.98e-91 4 827 20 878
AZN40051.1 1.82e-82 25 708 8 706

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.002305 0.364655 0.632372 0.000214 0.000212 0.000231

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001591_01010.