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CAZyme Information: MGYG000001571_00376
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Lacrimispora sp000526575 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lacrimispora; Lacrimispora sp000526575 | |||||||||||
| CAZyme ID | MGYG000001571_00376 | |||||||||||
| CAZy Family | CBM50 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 183091; End: 184548 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK06347 | PRK06347 | 2.06e-15 | 2 | 205 | 394 | 591 | 1,4-beta-N-acetylmuramoylhydrolase. |
| smart00257 | LysM | 1.16e-14 | 163 | 205 | 2 | 44 | Lysin motif. |
| PRK06347 | PRK06347 | 2.28e-14 | 11 | 208 | 333 | 526 | 1,4-beta-N-acetylmuramoylhydrolase. |
| smart00257 | LysM | 2.35e-14 | 11 | 53 | 2 | 44 | Lysin motif. |
| cd00118 | LysM | 2.73e-14 | 162 | 205 | 2 | 45 | Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ADL02858.1 | 1.14e-155 | 1 | 485 | 1 | 431 |
| QRV18940.1 | 1.14e-155 | 1 | 485 | 1 | 431 |
| ADL05727.1 | 1.18e-127 | 1 | 484 | 357 | 855 |
| SET90038.1 | 5.35e-112 | 1 | 485 | 189 | 766 |
| QUH21634.1 | 3.54e-54 | 2 | 208 | 10 | 184 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4B8V_A | 3.48e-16 | 11 | 206 | 44 | 217 | ChainA, Extracellular Protein 6 [Fulvia fulva],4B9H_A Chain A, Extracellular Protein 6 [Fulvia fulva] |
| 5K2L_A | 1.34e-10 | 81 | 126 | 4 | 49 | Crystalstructure of LysM domain from Volvox carteri chitinase [Volvox carteri f. nagariensis],5YZK_A Solution structure of LysM domain from a chitinase derived from Volvox carteri [Volvox carteri f. nagariensis] |
| 5YZ6_A | 8.78e-10 | 10 | 54 | 4 | 48 | Solutionstructure of LysM domain from a chitinase derived from Volvox carteri [Volvox carteri f. nagariensis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P54421 | 5.31e-12 | 10 | 205 | 27 | 192 | Probable peptidoglycan endopeptidase LytE OS=Bacillus subtilis (strain 168) OX=224308 GN=lytE PE=1 SV=1 |
| O31852 | 1.50e-11 | 10 | 208 | 89 | 271 | D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS OS=Bacillus subtilis (strain 168) OX=224308 GN=cwlS PE=1 SV=1 |
| O07532 | 1.72e-09 | 7 | 203 | 90 | 281 | Peptidoglycan endopeptidase LytF OS=Bacillus subtilis (strain 168) OX=224308 GN=lytF PE=1 SV=2 |
| Q49UX4 | 4.06e-08 | 9 | 205 | 27 | 193 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41) OX=342451 GN=sle1 PE=3 SV=1 |
| Q9P403 | 1.41e-07 | 79 | 206 | 107 | 228 | Intracellular hyphae protein 1 OS=Colletotrichum lindemuthianum OX=290576 GN=CIH1 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000064 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |