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CAZyme Information: MGYG000001549_02081

You are here: Home > Sequence: MGYG000001549_02081

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Gracilibacillus phocaeensis
Lineage Bacteria; Firmicutes; Bacilli; Bacillales_D; Amphibacillaceae; Gracilibacillus; Gracilibacillus phocaeensis
CAZyme ID MGYG000001549_02081
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1025 MGYG000001549_11|CGC13 113671.68 4.5206
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001549 4547476 Isolate not provided not provided
Gene Location Start: 584828;  End: 587905  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001549_02081.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 797 940 2.2e-19 0.953125

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 2.00e-59 712 959 19 245
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
smart00047 LYZ2 8.84e-25 786 950 2 147
Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.
NF000535 MSCRAMM_SdrC 6.63e-17 140 337 714 899
MSCRAMM family adhesin SdrC. Features of this protein family include a YSIRK-type signal peptide at the N-terminus and a variable-length C-terminal region of Ser-Asp (SD) repeats followed by an LPXTG motif for surface immobilization by sortase.
NF000535 MSCRAMM_SdrC 7.94e-17 135 332 715 901
MSCRAMM family adhesin SdrC. Features of this protein family include a YSIRK-type signal peptide at the N-terminus and a variable-length C-terminal region of Ser-Asp (SD) repeats followed by an LPXTG motif for surface immobilization by sortase.
COG5271 MDN1 4.15e-16 42 339 3825 4135
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QHS23523.1 3.75e-220 355 1023 175 850
SQI62956.1 2.96e-219 351 1021 31 722
QTN00811.1 7.68e-206 352 1021 229 912
VEF49624.1 2.41e-191 341 1023 26 725
QWC22601.1 4.95e-164 356 959 353 999

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6FXO_A 1.54e-41 765 958 62 243
ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50]
6U0O_B 8.39e-35 701 946 40 263
ChainB, LYZ2 domain-containing protein [Staphylococcus aureus subsp. aureus NCTC 8325]
6FXP_A 3.30e-34 701 946 10 233
ChainA, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50],6FXP_B Chain B, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50]
4PI7_A 4.22e-30 718 939 8 208
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]
4PI8_A 2.66e-29 718 939 8 208
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P39848 3.37e-51 684 958 622 879
Beta-N-acetylglucosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=lytD PE=1 SV=1
O33635 3.80e-38 742 958 1130 1334
Bifunctional autolysin OS=Staphylococcus epidermidis OX=1282 GN=atl PE=1 SV=1
Q5HQB9 3.80e-38 742 958 1130 1334
Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=atl PE=3 SV=1
Q8CPQ1 1.99e-37 742 958 1130 1334
Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=atl PE=3 SV=1
Q99V41 1.27e-36 765 958 1066 1247
Bifunctional autolysin OS=Staphylococcus aureus (strain N315) OX=158879 GN=atl PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000598 0.998661 0.000226 0.000179 0.000166 0.000153

TMHMM  Annotations      download full data without filtering help

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