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CAZyme Information: MGYG000001531_00877

You are here: Home > Sequence: MGYG000001531_00877

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Enterocloster sp001517625
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Enterocloster; Enterocloster sp001517625
CAZyme ID MGYG000001531_00877
CAZy Family PL22
CAZyme Description Oligogalacturonate lyase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
389 MGYG000001531_6|CGC2 44786.75 4.895
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001531 3412690 Isolate not provided not provided
Gene Location Start: 258855;  End: 260024  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001531_00877.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL22 173 372 2.6e-20 0.9238578680203046
PL22 33 147 1.3e-17 0.41132075471698115

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14583 Pectate_lyase22 8.06e-26 3 389 4 386
Oligogalacturonate lyase. This is a family of oligogalacturonate lyases, referred to more generally as pectate lyase family 22. These proteins fold into 7-bladed beta-propellers.
COG0823 TolB 4.72e-06 13 114 222 326
Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport].
PRK04922 tolB 8.35e-04 21 104 283 356
Tol-Pal system beta propeller repeat protein TolB.
PRK00178 tolB 0.001 21 102 278 349
Tol-Pal system protein TolB.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QQR02694.1 1.71e-270 1 389 1 367
ANU48417.1 1.71e-270 1 389 1 367
SET71872.1 1.19e-183 1 388 1 385
AJQ29048.1 7.60e-131 1 384 1 381
AWR87801.1 1.01e-123 11 385 2 378

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3PE7_A 5.19e-25 3 389 4 386
Oligogalacturonatelyase in complex with manganese [Yersinia enterocolitica subsp. enterocolitica 8081]
3C5M_A 2.85e-22 3 388 4 385
Crystalstructure of oligogalacturonate lyase (VPA0088) from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR199 [Vibrio parahaemolyticus RIMD 2210633],3C5M_B Crystal structure of oligogalacturonate lyase (VPA0088) from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR199 [Vibrio parahaemolyticus RIMD 2210633],3C5M_C Crystal structure of oligogalacturonate lyase (VPA0088) from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR199 [Vibrio parahaemolyticus RIMD 2210633]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q59418 4.74e-23 3 389 4 386
Oligogalacturonide lyase OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=ogl PE=4 SV=2
P21258 5.68e-22 12 389 13 386
Oligogalacturonate lyase OS=Dickeya dadantii (strain 3937) OX=198628 GN=ogl PE=2 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999914 0.000118 0.000003 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001531_00877.