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CAZyme Information: MGYG000001514_02579

You are here: Home > Sequence: MGYG000001514_02579

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Paenibacillus_A ihumii
Lineage Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus_A; Paenibacillus_A ihumii
CAZyme ID MGYG000001514_02579
CAZy Family SLH
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1957 MGYG000001514_12|CGC20 212992.74 4.3178
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001514 5923787 Isolate not provided not provided
Gene Location Start: 1131345;  End: 1137218  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001514_02579.

CAZyme Signature Domains help

Family Start End Evalue family coverage
SLH 1846 1885 5.1e-18 0.9523809523809523

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
NF033190 inl_like_NEAT_1 2.53e-13 1785 1954 580 754
NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.
pfam00395 SLH 1.62e-12 1846 1886 1 42
S-layer homology domain.
pfam00395 SLH 1.17e-10 1787 1828 1 42
S-layer homology domain.
pfam02368 Big_2 2.16e-09 1424 1491 2 65
Bacterial Ig-like domain (group 2). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins.
smart00635 BID_2 3.40e-07 1422 1492 2 71
Bacterial Ig-like domain 2.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUL53415.1 0.0 40 1415 43 1378
AKV86867.1 1.02e-182 54 1176 63 1176
QLD10783.1 1.99e-171 53 1168 51 1155
QFY10148.1 5.18e-142 46 1168 47 1118
QYR22776.1 3.35e-63 54 1276 77 1291

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q086E4 5.11e-18 1421 1687 132 374
Ice-binding protein 1 OS=Shewanella frigidimarina (strain NCIMB 400) OX=318167 GN=Sfri_1018 PE=1 SV=1
C6CRV0 8.94e-18 1759 1951 1249 1458
Endo-1,4-beta-xylanase A OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=xynA1 PE=1 SV=1
P19424 6.16e-17 1784 1957 38 219
Endoglucanase OS=Bacillus sp. (strain KSM-635) OX=1415 PE=1 SV=1
Q06852 6.73e-17 1792 1954 2087 2266
Cell surface glycoprotein 1 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=olpB PE=3 SV=2
P38535 5.90e-16 1784 1954 905 1083
Exoglucanase XynX OS=Acetivibrio thermocellus OX=1515 GN=xynX PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000813 0.698465 0.299553 0.000645 0.000292 0.000219

TMHMM  Annotations      download full data without filtering help

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