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CAZyme Information: MGYG000001514_02485

You are here: Home > Sequence: MGYG000001514_02485

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Paenibacillus_A ihumii
Lineage Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus_A; Paenibacillus_A ihumii
CAZyme ID MGYG000001514_02485
CAZy Family GH105
CAZyme Description Unsaturated rhamnogalacturonyl hydrolase YteR
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
365 MGYG000001514_12|CGC17 41504.18 4.6407
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001514 5923787 Isolate not provided not provided
Gene Location Start: 1012807;  End: 1013904  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001514_02485.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH105 33 360 1.9e-112 0.9608433734939759

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4225 YesR 3.62e-120 4 364 2 357
Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].
pfam07470 Glyco_hydro_88 2.09e-114 13 360 1 339
Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AZK46659.1 8.56e-271 1 365 1 365
QNK55786.1 9.05e-257 1 363 1 363
AFC29184.1 4.22e-249 1 364 1 364
AEI40556.1 8.52e-249 1 364 1 364
AFH61356.1 1.21e-248 1 364 1 364

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1NC5_A 2.45e-123 1 360 4 364
Structureof Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis]
2GH4_A 1.63e-121 9 360 2 354
ChainA, Putative glycosyl hydrolase yteR [Bacillus subtilis]
4WU0_A 4.64e-83 33 359 21 357
StructuralAnalysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824],4WU0_B Structural Analysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824]
3K11_A 5.38e-20 124 351 186 401
Crystalstructure of Putative glycosyl hydrolase (NP_813087.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 1.80 A resolution [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O34559 1.34e-122 1 360 4 364
Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1
P0A3U6 1.28e-23 144 359 1 227
Protein Atu3128 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=Atu3128 PE=3 SV=1
P0A3U7 1.28e-23 144 359 1 227
24.9 kDa protein in picA locus OS=Rhizobium radiobacter OX=358 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000059 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001514_02485.