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CAZyme Information: MGYG000001514_01436
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Paenibacillus_A ihumii | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus_A; Paenibacillus_A ihumii | |||||||||||
| CAZyme ID | MGYG000001514_01436 | |||||||||||
| CAZy Family | PL9 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 449579; End: 454765 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL9 | 1097 | 1467 | 2.7e-121 | 0.9733333333333334 |
| SLH | 1551 | 1591 | 3.2e-16 | 0.9761904761904762 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| NF033190 | inl_like_NEAT_1 | 5.55e-17 | 1549 | 1716 | 580 | 743 | NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading. |
| pfam07523 | Big_3 | 6.07e-12 | 448 | 513 | 2 | 67 | Bacterial Ig-like domain (group 3). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in a variety of bacterial surface proteins. |
| pfam00395 | SLH | 8.39e-12 | 1551 | 1591 | 1 | 42 | S-layer homology domain. |
| pfam00395 | SLH | 6.04e-11 | 1613 | 1655 | 1 | 42 | S-layer homology domain. |
| NF033190 | inl_like_NEAT_1 | 3.83e-10 | 1550 | 1662 | 642 | 751 | NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AWV34223.1 | 0.0 | 1 | 1473 | 1 | 1474 |
| ARK30471.1 | 0.0 | 2 | 1463 | 3 | 1476 |
| ADD02972.1 | 0.0 | 242 | 1727 | 38 | 1655 |
| QUW24060.1 | 0.0 | 163 | 1472 | 9 | 1318 |
| BAB04213.1 | 0.0 | 243 | 1468 | 38 | 1262 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1RU4_A | 7.53e-43 | 1103 | 1419 | 19 | 342 | ChainA, Pectate lyase [Dickeya chrysanthemi] |
| 5OLQ_A | 1.28e-13 | 1098 | 1385 | 2 | 326 | Rhamnogalacturonanlyase [Bacteroides thetaiotaomicron],5OLQ_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLQ_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLS_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron] |
| 6BT4_A | 4.15e-11 | 1542 | 1723 | 17 | 194 | Crystalstructure of the SLH domain of Sap from Bacillus anthracis in complex with a pyruvylated SCWP unit [Bacillus anthracis] |
| 3PYW_A | 5.72e-11 | 1557 | 1723 | 12 | 173 | Thestructure of the SLH domain from B. anthracis surface array protein at 1.8A [Bacillus anthracis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P22751 | 6.20e-77 | 771 | 1372 | 31 | 633 | Pectate disaccharide-lyase OS=Dickeya chrysanthemi OX=556 GN=pelX PE=1 SV=1 |
| P0C1A7 | 7.17e-42 | 1103 | 1419 | 44 | 367 | Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1 |
| P0C1A6 | 1.31e-41 | 1103 | 1419 | 44 | 367 | Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1 |
| P38535 | 8.52e-22 | 1548 | 1728 | 905 | 1084 | Exoglucanase XynX OS=Acetivibrio thermocellus OX=1515 GN=xynX PE=3 SV=1 |
| P38536 | 3.75e-20 | 1551 | 1728 | 1682 | 1858 | Amylopullulanase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=amyB PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000371 | 0.998585 | 0.000348 | 0.000249 | 0.000221 | 0.000201 |
