CAZyme Information: MGYG000001512_02727

Basic Information

• Species: Coprobacter secundus
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Coprobacteraceae; Coprobacter; Coprobacter secundus
• CAZyme ID: MGYG000001512_02727
• CAZy Family: PL15
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
882	MGYG000001512_19|CGC17	101640.3	8.9664

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001512	4253015	Isolate	not provided	not provided

• Gene Location: Start: 882598; End: 885246 Strand: -

Full Sequence      

MRRYIYLSILVLISVLLLSGKKNTTTIQLDLPTLMHEVRETPFPLNGATVTQNPPALMWP
DQFPHLGPVLDGVEETAHKPHVIYKIRLSQDPKFKKEVIETTRHWAFFNPFRTLKSGKWY
WQYAYINGNKETWSDILHFTISPQSSTFNPPSLEFLLQKLPQYHPRVLLDKKDWEDFRIR
NAKNKEAQWYIKRAQKAIQNPLKHIQEEIDTTKLSSLDNSVQRKSYLIRESRKIVDREEA
NIEALVRSYLLTQDNIYYKTAISRITEILSWKHSRYFAGDFNSSVLLSICTLGYDSFYDL
MTKNEKKILLEGIRENGNQFFEEFVNHLENRIADNHVWQMTLRILTMAAFTTYGDLPEAN
IWVDYCYNMWVARFPGLNDDGAWHNGDSYFHVNIRTLIEVPAFYSRITGFDFFSDPWYNG
SALYTIYHQLPGSMSAGHGNSHENMKKPNGSRVGYADALARECNNSYAADYVKKILEREP
DILKKSFLGKSGDLTWYRLTTHKQLPQNSPGLAELPHTKVFPQTGLVTMHTHPDRTEENA
MLSFRSSPYGSTSHALANQNAFNTFYGGQPIFYSSGHRTGFTDDHCMYSYRNTRAHNTIL
ADGMGQKIGTEGYGWIPRFYEGNNISYFIGDASNAYGEVTSPLWLERARLSGTKFSPENG
WDKNKVKTYKRHVAKLGDSGLFVIYDELEGTEPITWTFLLHTVTNPMDIKKNVSYTLVKG
ENKTGTSDAYILSSHPIDIKQSDEFFSPAINWLNKTDANGKRIEYKNHWHFSATTPKTKK
ARFLTIIDTHKKGEKRPTLNCTNNSISIDNWNIKCNLTENDEAYLIISSDTCKSGILYNA
PKMIIEKHKIKHKVDGSTLIIDQIKNKQIKKVLVDQLPELEI

Enzyme Prediction     

No EC number prediction in MGYG000001512_02727.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL15	536	688	1.2e-90	0.9743589743589743

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16332	DUF4962	0.0	33	503	2	476	Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940	Hepar_II_III	1.45e-06	513	701	1	165	Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BCI64400.1	0.0	1	882	1	882
QRN02072.1	0.0	7	882	5	872
CBK68718.1	0.0	7	882	10	877
QUT70285.1	0.0	2	882	5	873
QQA07265.1	0.0	2	882	5	873

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6LJA_A	0.0	5	882	4	868	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
6LJL_A	0.0	5	882	4	868	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
3A0O_A	4.11e-41	44	787	28	734	Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A	7.24e-40	44	787	28	734	Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.009600	0.314336	0.675291	0.000265	0.000247	0.000232

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001512_02727.