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CAZyme Information: MGYG000001512_02148

You are here: Home > Sequence: MGYG000001512_02148

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Coprobacter secundus
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Coprobacteraceae; Coprobacter; Coprobacter secundus
CAZyme ID MGYG000001512_02148
CAZy Family GH110
CAZyme Description Alpha-1,3-galactosidase B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
569 MGYG000001512_19|CGC2 64541.77 8.168
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001512 4253015 Isolate not provided not provided
Gene Location Start: 109623;  End: 111332  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001512_02148.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH110 28 568 2.5e-166 0.9927007299270073

CDD Domains      help

MGYG000001512_02148 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCI63976.1 0.0 1 569 1 569
QUT74394.1 2.53e-180 42 569 18 549
QOY89544.1 2.06e-174 11 568 5 569
BCI63983.1 5.47e-161 26 569 24 580
QTN33916.1 6.94e-161 28 568 35 594

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7JW4_A 3.37e-151 25 567 25 592
Crystalstructure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta],7JW4_B Crystal structure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta]
7JWF_A 1.90e-150 25 567 25 592
Crystalstructure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_B Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_C Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_D Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B1KD83 1.12e-124 11 564 19 574
Alpha-1,3-galactosidase A OS=Shewanella woodyi (strain ATCC 51908 / MS32) OX=392500 GN=glaA PE=3 SV=1
A6KWM0 1.53e-79 26 567 22 590
Alpha-1,3-galactosidase B OS=Phocaeicola vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / CCUG 4940 / NBRC 14291 / NCTC 11154) OX=435590 GN=glaB1 PE=3 SV=1
A6L2M8 7.93e-79 25 569 21 592
Alpha-1,3-galactosidase B OS=Phocaeicola vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / CCUG 4940 / NBRC 14291 / NCTC 11154) OX=435590 GN=glaB2 PE=3 SV=1
Q89ZX0 1.46e-77 11 560 9 572
Alpha-1,3-galactosidase B OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=glaB PE=3 SV=1
Q5LGZ8 6.92e-77 17 569 15 595
Alpha-1,3-galactosidase B OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / NCTC 9343 / Onslow) OX=272559 GN=glaB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.026821 0.402065 0.569785 0.000435 0.000436 0.000450

TMHMM  Annotations      download full data without filtering help

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