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CAZyme Information: MGYG000001503_02169
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Fermentimonas caenicola | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Dysgonomonadaceae; Fermentimonas; Fermentimonas caenicola | |||||||||||
| CAZyme ID | MGYG000001503_02169 | |||||||||||
| CAZy Family | GH55 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 1407213; End: 1410227 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH55 | 38 | 619 | 4.9e-81 | 0.7891891891891892 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam08450 | SGL | 2.07e-12 | 904 | 992 | 145 | 243 | SMP-30/Gluconolaconase/LRE-like region. This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30), gluconolactonase and luciferin-regenerating enzyme (LRE). SMP-30 is known to hydrolyze diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 and LRE. |
| pfam12708 | Pectate_lyase_3 | 9.83e-11 | 38 | 214 | 1 | 171 | Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28. |
| pfam12708 | Pectate_lyase_3 | 1.85e-09 | 375 | 497 | 1 | 134 | Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28. |
| COG3386 | YvrE | 6.41e-08 | 700 | 993 | 2 | 274 | Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]. |
| cd05819 | NHL | 3.06e-07 | 719 | 964 | 4 | 226 | NHL repeat unit of beta-propeller proteins. The NHL(NCL-1, HT2A and LIN-41)-repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures. The repeats have a catalytic activity in Peptidyl-glycine alpha-amidating monooxygenase; proteolysis has shown that the Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL) activity is localized to the repeats. Tripartite motif-containing protein 32 interacts with the activation domain of Tat. This interaction is mediated by the NHL repeats. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QUU00135.1 | 0.0 | 13 | 1002 | 15 | 1004 |
| QMI79027.1 | 0.0 | 1 | 1002 | 1 | 1003 |
| BBK89258.1 | 0.0 | 18 | 1002 | 19 | 1003 |
| QQA31095.1 | 0.0 | 18 | 1002 | 19 | 1003 |
| QUT62545.1 | 0.0 | 18 | 1002 | 19 | 1003 |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.024118 | 0.971824 | 0.003213 | 0.000272 | 0.000253 | 0.000267 |